| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1652 |
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| Symbol | |
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| ID | 5410561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1728089 |
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| End bp | 1730152 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640868886 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001404812 |
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| Protein GI | 154151194 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0030302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGCTTG CTCTTACCGG GTATTTTGCG TTTTTTGCCA TTACCCGTGT GGGCTCCTAT
GCACAGGGGA GCAGTGAGGC ACTGGGAATG GGGATGGCAG ACCAGAGCTC GGCAGCGCTT
CTGTCTCTGG GAGAGGAGTA CCTGCAGCGC ATCACCGCCG ACCAGGCAAA TGTCACAGAT
ACCCTCTTTG CCGATACCGA TACCGATACC GAGATGGAGA TCCTTGCAGC ACAGACCGCG
GAGCTCAAGC GTAATTCCCC GGTGAAGGCT ATAACTCCGA CCTATCTGGC AACGCAACCT
CCATCGGATC CCATGGCCGG GGCGGTGCTG GTCTTTGCCC AAAATGCAAC TGTAACCCCG
GAATCACAGG AGGCGCGAAC GCTTGCCGGT CTTGCAGACA GTCTCAAAGG GGTATATGAC
TCAGATGAGG ATATGGCGAG TGTCTATATT GGCACGGCCT CCGGCATGAT GCTCTATTAC
CCGGGACAGG GGAATTTCCC CAAAGACTAT GATCCCCGGA CACGGCAATG GTTTACTGAT
GCTGAAGCGT CGCCAGAGAT TGTCTGGTCC GACGCTCCGT ATGTAGATGC TGGTGGCAAT
GGTCTTGTTA TGACCTCGTC GGAGGATATA ACCGGTCCGG CCTATGGAAA CTGGGTAATC
GGATCTGATG TAAAGACCGA TACGATTAAT GAGGATTTTA TCGGGAAAAC GCTGGGCGGG
AACGGGTATG CCGTGCTCAT CAACCAGGAG GGTACGATCA TCAGCCAGCC CGGGCTGTCT
GCCGGCAATC AGACCTGGAA CAAGCCATTC ACCCAGAAAA ATGTGCTCTC GGGCAGCGCT
CCCGATCTCC GTGCCGTGGT CACCAATATG ACCGCCGGAA AGACCGGTAT CGGCACAGTA
AACTTCAGCG GGACAGAGAC ATACGTTGCC TATGCACCGG TCCGTTCCAT GAACTGGAGC
CTTGCGGTCT CGATCCCGGT CAGCCAGATC ACTGAACCGG TTCAGGAGTT CACCGGGAAA
ATTGAAGATG CGACCCGGGA TACCGGGACA CAGATTACTG CCCAGACAGA CTGGCTCAAG
GAAGTTTTTG CGATCCTTTT TGTCGTTATC CTGCTCGTGG TCCTGCTTGT GTCCATTGAA
CTCAGCCGGG TGATTACCCG GCCCGTTGAG CAGCTCAAAG AGGGAGCAGC GGCCATCGGT
GAAGGGGACC TCGCGTTCCG TGTGAATATC CAGTCGGGTG ACGAATTTGA GGATCTTGCC
CGGTCCTTCA ATGTCATGGC CGGTGCGCTC CAGGAAAATA TTGAAAATCT CCGGCGGACT
ACCGCGGAAA AGGAGCGGTA CGCAAAAGAA CTGGAGATTG CCCGCTCCAT CCAGACCAGT
TTCCTCCCTG AAAAAATGCC GGACATTCCC GGGTATGATA TTTCGGCAGT TATGATACCG
GCGATGGAAG TGGGCGGGGA CTTTTACGAT ATTATCCCGG CAGCTGATGG AAAATGGGCG
TTTGTCATTG CAGATGTCTC CGGGAAAGGG GTCAGCGCCG CACTCTTCAT GGCCATGTCA
AGAACGCTGC TTCGCGCCGG CCTTGAGAAT GCATCCGATC TTTCCTGTGC TATTGGTACT
GCAAACCAGG TCATATCCCG GAACGCACCG TCATGTATGT TTGTAACAGT ATTTACTGCG
CTCCTCGATC TTCCTGCCCG AACGTTCACC TGCATCAATG CCGGTCACAA TCCACCTCTT
CTTGTCCGGG GTAAGAGCGG CGAGACGGTG TTTTTCCATG AAGGTGGCGT CGCGCTGGGA
GTCCAGCCTG AAATCAAAAG CGTCCAGGAA TGCGTGCAGC TCCAATCCGG GGATCTCGTG
ATCCTGTATA CTGACGGCGT GACTGAGGCC TTCGATGCTG CGTATACCCC GTTTGGCGAG
GATCGGTTGG TAGAAATCGC AAAAGAGTGC AGCAACCTTC CGGCTGACCG GGTAAGGGAG
GGGATCATAG CGGGAATCCG CGCATTTACC GGCCCGGTTC CCCAGTCTGA CGATATCACC
CTCGTCGTGA TCCGGGTGCT GTAA
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| Protein sequence | MALALTGYFA FFAITRVGSY AQGSSEALGM GMADQSSAAL LSLGEEYLQR ITADQANVTD
TLFADTDTDT EMEILAAQTA ELKRNSPVKA ITPTYLATQP PSDPMAGAVL VFAQNATVTP
ESQEARTLAG LADSLKGVYD SDEDMASVYI GTASGMMLYY PGQGNFPKDY DPRTRQWFTD
AEASPEIVWS DAPYVDAGGN GLVMTSSEDI TGPAYGNWVI GSDVKTDTIN EDFIGKTLGG
NGYAVLINQE GTIISQPGLS AGNQTWNKPF TQKNVLSGSA PDLRAVVTNM TAGKTGIGTV
NFSGTETYVA YAPVRSMNWS LAVSIPVSQI TEPVQEFTGK IEDATRDTGT QITAQTDWLK
EVFAILFVVI LLVVLLVSIE LSRVITRPVE QLKEGAAAIG EGDLAFRVNI QSGDEFEDLA
RSFNVMAGAL QENIENLRRT TAEKERYAKE LEIARSIQTS FLPEKMPDIP GYDISAVMIP
AMEVGGDFYD IIPAADGKWA FVIADVSGKG VSAALFMAMS RTLLRAGLEN ASDLSCAIGT
ANQVISRNAP SCMFVTVFTA LLDLPARTFT CINAGHNPPL LVRGKSGETV FFHEGGVALG
VQPEIKSVQE CVQLQSGDLV ILYTDGVTEA FDAAYTPFGE DRLVEIAKEC SNLPADRVRE
GIIAGIRAFT GPVPQSDDIT LVVIRVL
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