| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1647 |
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| Symbol | |
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| ID | 5411192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1724284 |
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| End bp | 1724964 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868881 |
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| Product | ABC transporter related |
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| Protein accession | YP_001404807 |
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| Protein GI | 154151189 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.204823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000330012 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATA TGCCACTTAT CCGACTCAAT GATGTCTCAA AAATATACCA TCTGGAGAGT
GGTGACTTTA CCGCGCTCGA TCATGTAACT CTCGATATTG CCGAGAACGA ATTCGTGGCG
ATCATGGGAC CGTCAGGGTC GGGCAAATCA ACGATGATGA ACCAGCTGGG GATCCTCGAT
GTCCCGACCA CCGGGGAACT TTTTATTGCC GGCGAAAACG TGGCAAAGAT GTCCAGCCTC
GAACGGACGC ACATGCGCCG GGATATCATC GGGTATATCT TCCAGAAATT TTACCTGATC
CCTCTCCTTT CCGCGTACGA GAACGTAGAA TATCCGCTTA TCCTCAAGTA CAAAAAGCGG
GACACCACCG GCCGGGCTGC CGGATACCTC AAGGCTGTTG GCATTGATGA GGAAAAAAGC
GCCCACCGTC CCAACCAGCT GTCAGGTGGT CAGCAGCAGC GTGTGGCCAT AGCGCGGGCA
CTGGTTAATG ATCCCAAGAT CCTTCTCTGC GATGAGCCGA CCGGGAACCT TGACAGCAAG
ACAGGCCTTC AGATTATGGA GATCCTCTGC GATCTCCACC GGAAAGGAAA GACGGTGATC
ATCGTGACGC ACGACCAGAA GATCGCGGAT TACGCCCAGC GGACGATCCG GCTCGCTGAC
GGCAGGGTCG TGGACTCATG A
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| Protein sequence | MSDMPLIRLN DVSKIYHLES GDFTALDHVT LDIAENEFVA IMGPSGSGKS TMMNQLGILD
VPTTGELFIA GENVAKMSSL ERTHMRRDII GYIFQKFYLI PLLSAYENVE YPLILKYKKR
DTTGRAAGYL KAVGIDEEKS AHRPNQLSGG QQQRVAIARA LVNDPKILLC DEPTGNLDSK
TGLQIMEILC DLHRKGKTVI IVTHDQKIAD YAQRTIRLAD GRVVDS
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