Gene Mboo_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1636 
Symbol 
ID5412277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1713461 
End bp1714624 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content57% 
IMG OID640868870 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001404796 
Protein GI154151178 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000919335 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATGA CCCGCCTTGA ATTACGGAAA TTTGTTGCTC CCGAACTGCT TTTTGGGAGT 
GGCGCACGGC ATCTTGCCGG CAGGTATATC CGGAACTTTG GTGCAAAAAG CGTGCTGCTG
GTCACGGATC CCGGCGTCCG GAAAACCGGG GTAGTCGATG AGGTCGGTGC CGATCTCCAG
CGGGAAGGGA TAGGATACGA GATCTACTCG GATATCAAGC CAAACCCGAC GGTCGAAAAT
GTGATGGGGG GCGCTGAGTT TTTTTCGCAA GGAAGGTGCT CTGCACTTAT TGCGGTAGGA
GGAGGATCGG TTATCGATTG TGCAAAGGGG ATTGGCATTG TCTCTTCAGA AAACCGGCCG
ATCACCGAGT TCGAAGGCGT TGATCTGATT ACCGTGCCTC CTCCCCCGCT GATCTGTATT
CCTACAACCG CAGGTTCAAG TGCGGATGTC TCGCAGTTTG CCATTATTTC TGATTCTGTA
CGCAGGGTCA AGATCGCCAT TATCTCCAAG GCACTTGTTC CCGATGCCGC CCTTATCGAT
CCTGAACCCC TGCTCACCCT TCCCCCGGAT CTTACGGCAT ACACCGGCCT TGATGTTCTT
GTCCATGCCA TCGAAGCCTA TGTCTCTAAC GCGAGCTCGC CGCTGACCGA TCTTTACGCG
CTTGAGGCGA TCCGGAGGAT CTGCCGGAGT CTTGAAAATG CCGTAGCCTC CCCCTGCGAT
CTCTCTCTCC GCGAAGAGAC CATGCTTGCG AGTATGTATG CCGGCCTTGC CTTCTCCAAC
GCAAGCCTCG GGGCGGTGCA CGCGATGGCG CACAGCCTGG GCGGGTACCT TGACCTGCCC
CATGGAAAAT GTAATGCACT GCTGCTCGAC ACGGTCATTG CCTATAACTA CTCATCGGCG
CGGGAACGGT ACCTGGATAT CGGTGAGGCT ATGGGAATTG CGGTTCGTTC CCAGCCGGAA
GAAAAGCGCC TCCCGGCGAT CACCGGGGAG ATCCGCCGGT TGCGCGCAGC ACTGGGGATC
ACGGAGACGC TGGCCGACCT CGGCGTAACA AAATCCACGA TCCTGCTGCT TGCCGACAAT
GCAATAAAAG ATGCGTGTAT GGCCACCAAT CCCCGGGACC CTGCCCTTGA AGAGATCCGG
GTGCTCTATG AATCCGCACT CTGA
 
Protein sequence
MSMTRLELRK FVAPELLFGS GARHLAGRYI RNFGAKSVLL VTDPGVRKTG VVDEVGADLQ 
REGIGYEIYS DIKPNPTVEN VMGGAEFFSQ GRCSALIAVG GGSVIDCAKG IGIVSSENRP
ITEFEGVDLI TVPPPPLICI PTTAGSSADV SQFAIISDSV RRVKIAIISK ALVPDAALID
PEPLLTLPPD LTAYTGLDVL VHAIEAYVSN ASSPLTDLYA LEAIRRICRS LENAVASPCD
LSLREETMLA SMYAGLAFSN ASLGAVHAMA HSLGGYLDLP HGKCNALLLD TVIAYNYSSA
RERYLDIGEA MGIAVRSQPE EKRLPAITGE IRRLRAALGI TETLADLGVT KSTILLLADN
AIKDACMATN PRDPALEEIR VLYESAL