Gene Mboo_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1630 
Symbol 
ID5412271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1705595 
End bp1706401 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID640868864 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001404790 
Protein GI154151172 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.822479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0323586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGC TCCTCCGGCG CCAGATCCTC AGGAAAACCG GTGGCATGGA TATCCCGCTT 
GTCGGATTTG CCCCGGCAGA GCGCTGGAAC AATCCCCTGT TCGAACCCTG GGTCCCGGAG
GCATTCCGGC CGGCATCCCT TGTTCCCGGG ACAAAAAGTG TGATCGTGAT CGGATTCCCG
GTCAGCCTCC CGATCGTGGA CACTGCACCG TCCATCTGGT ACCACGAGCT GTACCATGTG
GTTAACGAGA CTCTTGATGC CTGTGCGTAC CGCCTTGCCA CATTCCTGAC TGAGAAAGGT
TACCCCTCGG TCTGGGTCCC CCGCGACGGG TACGGGTCGA TTACGGTCCT AAAGGAGAAC
CCGGCAGCTT TCTTTTCCCA CCGGCATGCG GCTTTCTGCG CGGGTCTTGG CACATTCGGG
GAGAACAACA TGCTCCTTAC CCCCCAGTAC GGCCCCCGGG TCAGGTTTGC TTCCATTCTC
ACCTCAGCCG AAATCCCCGG TGACCCGGTT TTAGAGGAAT CCCTCTGCAT CCGTTGCGGG
CGTTGTGTAT CCGCCTGCCC CGTATCGGCT GTAAAAAGCG GCGGTTACCC GGCACACCTT
ACCGATAAGC ATGCCTGTGC ATGCCGGTCA GAAGAACTCC GGGACCGGTA CCTGTCCCCG
TGCGGGTGCT GCATCAAGGT CTGCCCTGTG GGAAACGACC GGCAGCAGTA CAACCGCAAC
GACATGCGGA TGTACGATGA CCACAACCCC CTCTCCGAAC CCTATCGCCG CGTCCGTGAC
CATGTCCGAT CCTACGGGTC GCGGTGA
 
Protein sequence
MSSLLRRQIL RKTGGMDIPL VGFAPAERWN NPLFEPWVPE AFRPASLVPG TKSVIVIGFP 
VSLPIVDTAP SIWYHELYHV VNETLDACAY RLATFLTEKG YPSVWVPRDG YGSITVLKEN
PAAFFSHRHA AFCAGLGTFG ENNMLLTPQY GPRVRFASIL TSAEIPGDPV LEESLCIRCG
RCVSACPVSA VKSGGYPAHL TDKHACACRS EELRDRYLSP CGCCIKVCPV GNDRQQYNRN
DMRMYDDHNP LSEPYRRVRD HVRSYGSR