Gene Mboo_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1629 
Symbol 
ID5412270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1704638 
End bp1705561 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content55% 
IMG OID640868863 
Producthypothetical protein 
Protein accessionYP_001404789 
Protein GI154151171 
COG category[S] Function unknown 
COG ID[COG2899] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.458622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0210196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTC TTTCGATTCT CTTAACCATC GCCGGGCTCT GCCTTTTTGA GACGATCACA 
AGCATTGACA ATGCCATTAT CAATGCCGAG GTTCTCTCCA CCATGTCGCA AAAGGCACGA
CGGTGGTTCC TGATCTGGGG TCTCCTTTTT GCCGTCTTTG TGATCCGGGG CGTGCTGCCC
TGGCTGATTG TCTGGGCCTC AGCACCCTCG CTTGGGCCGG TTGGCGCACT CACCGCAACC
TTTTCTAGCG ACCCCGCGGT TGTTGCCGCA ATCGCCCAGG CCGCCCCGAT CCTTCTTGTG
GGCGGCGGGA CATTCCTTAT CTTCCTCTTT TTACACTGGA TCTTTTTAGA GGAGAAGGAG
TACGGGATCT GCGGCGAGCG TTATATCGCT ACAAAGGGTG TCTGGTTCTT TGCCGTGGTC
TCAATCTTCC TTGCCGGCCT TGTCTGGCTT GCCATAAGCA AAAATCCCAT GATGGCCTTT
GGTGCGGTTG TGGGCTCCTC GGCATTTTTC ATTGTGCACG GGTTCCGGCA GAATGCAGAG
GAGCATGAGA GAAAAATGGT CTCGGGCGAT CTCTCCGATA TCAGCAAGAT CTTTTACCTG
GAGATCATCG ATGCCACATT CTCCATCGAC GGGGTCATGG GAGCCTTCGC GTTTACCATG
GCAGTCCCGC TCATCATCAT AGGTAACGGG ATTGGTGCCC TGATTGTCCG GGAACTGACC
GTAAGGAACG TGGACACAAT CCGGAATTAC CGGTACCTGA AAAACGGGGC CATGTATTCC
ATCCTCATTT TGGGCATTAT CATGATCCTG GATGGCTTTG GCGCCGGCAT CCCTGAGTAT
GTCTCCCCGA TCGCCACTTT TGGCATTGTC GGGTATTTCC TGTACCGCTC CATCCGGGCA
GCCCCGCCGG CCGGTACTAC GTAA
 
Protein sequence
MEILSILLTI AGLCLFETIT SIDNAIINAE VLSTMSQKAR RWFLIWGLLF AVFVIRGVLP 
WLIVWASAPS LGPVGALTAT FSSDPAVVAA IAQAAPILLV GGGTFLIFLF LHWIFLEEKE
YGICGERYIA TKGVWFFAVV SIFLAGLVWL AISKNPMMAF GAVVGSSAFF IVHGFRQNAE
EHERKMVSGD LSDISKIFYL EIIDATFSID GVMGAFAFTM AVPLIIIGNG IGALIVRELT
VRNVDTIRNY RYLKNGAMYS ILILGIIMIL DGFGAGIPEY VSPIATFGIV GYFLYRSIRA
APPAGTT