| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1622 |
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| Symbol | |
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| ID | 5412191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1697522 |
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| End bp | 1699219 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868856 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404782 |
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| Protein GI | 154151164 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0238251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA GTCGCAGTAT GTGGAGGAAA ATCCCGGGGC TCGATCCCCG TTTTTCCCTG
ATTCTTGTTT TTATGGGAAT GTTTGTCCTG ACCGGCATTT TTGAGACGGG CTATAACTTT
TTTTATCCGT ATCCCGGGAT GTGGGAGGTT TCCCTTCTTA CCATGGTCGT GGTGAGTGCA
TGCGGAGCAT TCATCGCATT CTTCCCCATA CGGTCTCTCC GTACCGCAGA AGCCCGACTG
GACACGCTCC TGAATGGTTC CCCGGCCCCG CAGTTTGTGA TCGACGCGGA TCACCGGGTT
ATTTTCTGGA ACCGGGCCAT GGAGATCGAG AGCGGGATCA AGGCTGCAGA AATGTACGGC
TCCACGGATC CCTGGCGTGC GTTTTATACT GAACAACGCC CGACCCTCGC CGATCTCCTT
GTGGACGGAA ATGTTGAAAA ATTTCCCGAA TGGTATACGG GCAGGATCAC CCGGTCCCCG
CTTATCGACG GATCGTATGA AGCAGTGGAT TTTTTCCCGC ATATCGGAAA AAATGGCAGA
TGGTTCTATT TTACCGCATC ACCGGTCCGT GACGATAAGG GCGTCCTTCT GGGGGCTGTC
GAATCATTCA TTAATGTGAC CAGGAGTAAA CGTACCGAAG AGGTGCTTAA AGCCAACAAG
CTCCTGCTTG AAGATTCAAT GGAACTGGCG CACATGGCAT ACTGGGAATT TGATTTGCCA
TCGGGTACGT TCATCTTTAA CGACCGGTTC TACGCCCTTT ATGGTACAAC CGCAGAGCGC
GAAGGGGGGT ACCGGATGCC AGCGGATGTT TATGTGAAAA ATTTCGTCCT CCCTGAAGAC
GCCGGTCTCG TTCAGGAACG GATCGCCGCA TCCCTCTCCT CACAAGGCCC GGACACACCC
TCTGAACTGG AGCACCGGAT TATCCGCAGG GATGGTGAGA TCCGGTATAT CAAGGTGCGT
ATCCGCACAA CCCGGGACAA AACGGGTCGC ACGATCCGAT CCAATGGGGC AAACCAGGAT
ATTACCCTAC GGATACAGGC ACTGATCTCC CTCAAAGAAA GCGAAGCGCG GTACCGGAAT
GTTGTCGAGG ACCAGACGGA ATTCATCTCC CGGTTCTTAC CGGATGGCAC GCATGTTTTT
GTCAACGATG CCTACTGCCG GTATTTCGGG CTGAAGCGCG AAGATATCAT CGGACACCGC
ATCCGCCCCC GGATCCCCGC TGAAGACCGG GAACGGGTGA AACAGTTCTT TGCATCCCTG
ACCCCGGACC ATCCGGTCGA TAGCATCGAA CACCGGATCA TCATGCCGGA CGGCACAATA
CTGTGGCAGC GATGGAGCGA TCGTGCGATC TTCGATTCTT CCGGAACGAT CACCGGATAC
CAGTCGGTAG GCCGGGACAT TACCGAACAA CGACAGGCAG AGATCGCGCT CAAAATAAGC
GAGGCGCGTT TCCTCGCGTT TATCAGCGAG GCAGCCATGC GGTTGAAAAA TCCCCTTACC
CTTATCGAAA ACAACCTTGA GTCTGTGGTA AGCGATATCG ACCGGGGCAA AGTGAGCATT
CCTGATCTTA CCCTCCAGCT CAGGCTGCAG ACAAAGAACC TCGCGCAGAT CCGCAGTAAC
ATCAACGAGT TGAACAGGGC AATTGTCGAT CATTCGGGCG GGATCCCGGA TGCCTCGAAA
AAATTCCTGA CAGAATAA
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| Protein sequence | MMDSRSMWRK IPGLDPRFSL ILVFMGMFVL TGIFETGYNF FYPYPGMWEV SLLTMVVVSA
CGAFIAFFPI RSLRTAEARL DTLLNGSPAP QFVIDADHRV IFWNRAMEIE SGIKAAEMYG
STDPWRAFYT EQRPTLADLL VDGNVEKFPE WYTGRITRSP LIDGSYEAVD FFPHIGKNGR
WFYFTASPVR DDKGVLLGAV ESFINVTRSK RTEEVLKANK LLLEDSMELA HMAYWEFDLP
SGTFIFNDRF YALYGTTAER EGGYRMPADV YVKNFVLPED AGLVQERIAA SLSSQGPDTP
SELEHRIIRR DGEIRYIKVR IRTTRDKTGR TIRSNGANQD ITLRIQALIS LKESEARYRN
VVEDQTEFIS RFLPDGTHVF VNDAYCRYFG LKREDIIGHR IRPRIPAEDR ERVKQFFASL
TPDHPVDSIE HRIIMPDGTI LWQRWSDRAI FDSSGTITGY QSVGRDITEQ RQAEIALKIS
EARFLAFISE AAMRLKNPLT LIENNLESVV SDIDRGKVSI PDLTLQLRLQ TKNLAQIRSN
INELNRAIVD HSGGIPDASK KFLTE
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