Gene Mboo_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1621 
Symbol 
ID5412190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1696926 
End bp1697510 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID640868855 
Producthypothetical protein 
Protein accessionYP_001404781 
Protein GI154151163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0377801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA CCCAGGCTGA TCTCAAAGAC GAGGGGCTGT ACCTGATTAC CGCCCCTGCT 
GCACGAATGA GGGAAGAAAA TATTAATCTG ATCCGGATGC TGCTTTTGCG GGATTATTAC
GTGCTCGTAG TCACGGTAAA CCTGCCCTAT GATATCCTCA AAAAGAACTA TGCGGAGAAA
GGGATCCCGA TGGAAAAGAT ATTTGTGGTC GATACTGTCA CGAAATACGC GATAGGGCAC
GATCACGAAC CGGTGTTAAA CTGCCGGTTC GTCGGCAACC CTTCTGATCT TACCGATCTT
GGGATCGCCA TCACGGGAAT CTTAAGCAGT AACAAGGAGA AGAAAATTTC CCTGCTCTTT
GATTCGGTCA ATGCAATGCT TATCTATATC TCGTCCCAGA ATATCACCAA GTTCATCCAT
TTTGTCACGA ATAAACTGCG GCTGATGAAA TTTTCCGGGA TCTTCCTTGC TGTGGAGAAG
GGACTTGATC CTAATCTTCT CCTCCAGCTG ACAACCTTTG TGGACCGGGT TATTGATGTG
GATGAGGAAG GTACCGGGGC AGTGCAGTCG GAGCTAAAAG AGTAA
 
Protein sequence
MAITQADLKD EGLYLITAPA ARMREENINL IRMLLLRDYY VLVVTVNLPY DILKKNYAEK 
GIPMEKIFVV DTVTKYAIGH DHEPVLNCRF VGNPSDLTDL GIAITGILSS NKEKKISLLF
DSVNAMLIYI SSQNITKFIH FVTNKLRLMK FSGIFLAVEK GLDPNLLLQL TTFVDRVIDV
DEEGTGAVQS ELKE