Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1616 |
Symbol | |
ID | 5412185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1689688 |
End bp | 1691367 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640868850 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001404776 |
Protein GI | 154151158 |
COG category | [S] Function unknown |
COG ID | [COG1624] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.477909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.117342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTG TCCTGTTTGT CGATGACAAT ACCGAGTTCC TTGCGCAGTT CCGCCCGGTC CTTGAAAAGA CCGGCGAGAT GAAGCTTGAG GTGGTGGCCT CCACCAAGCA GGCAATCGAG AAACTCAAGA ACCGGGCCTT TGATGTGATT GTCTGTTACG AGGACATCTC GCCGGTCAAC GGCATCGATT TTGTCCCCGA CATGGATGGC GTCGGCTTTT TGCGATACCT CCGCTCCATG GGAAACCCCA CACCGGTCCT CCTTTTTCAT CGTAAAAGCG AGAGCCGGGT GGCTTTTGCC GAGGTCAGCA ACGGCTCGGA GATCGCCATT CCCCGCGCTG CTGACCTGCG TTCACCGGCA GCAGATCTCC TCACGCTCAT CAGGCAGGCT GCGCTAAGAA AGAAAGCCGA GCGCGACATC AAGGCGCAGA ACGATCAGCT CACCGCGATT CTCTCGGCAA CGCCTCTTGG AATCTTCAAC ATGAAGAACG GGATCATCGA ATGGGTCAAC CATCCGCTCA CAGCCCTTCT TGGAGTCCCG GAGTCCTCGA TCGTGGGAAA ACCGGTCCGC TCGCTTTTCG TAACCGAGGA GGAATACGTG CAGGTCTGCC GGGACCTCCA GATCCGCCGG GACGTGCTCG GGAACGGGTG TGCTGACTGC GAACTTGTCC GCCCGGGCGG GAGCATCCTT CCTTGCACTC TCCAGGCCAG GCTTCTTGAC CCGCTTGATG CAAAAAAAGG CGGTACCGTT GTCGTCACCG ACATCTCCGA GCGGAAAAAG ATGCGCGATG CCCTCAAGGA GAGCGAGGCA AAGTACCGCG AGATGATGCA GAATGCCCAG AGCATCATCG TGCGTATGGA CATGCAGGGC ACGATCACGT ATGTCAACAC CTACGCGGCG GCGTTCTTCG ATTACCCCGA GGCAGGCCTT GTCGGGAAGA ACGTGGTCGG GACCATAGCT CCCGAGAAGA ACCGGGGCGG CCATGATCTC TCGATGATGG CAAACGATCT CGGGTTCAAT GCCGAGGGGT ACGCGATCAA CGTCAGCGAG AATATCCGGC GGAACGGGGA TATTGTCTGG ATCGCGTGGA TCAACAAGGC GATCCGCGAC CCGCAGGGCC ATATCGTGGA AGTGCTCTGT ATAGGTCACG ATATCACCGA CCGGAAACGG AGCGGGGAAG TACGGATCAG CACCGATACC TGGAAAGACC AGGTGGTTGC AGATACCGAT GTGCGCGAAG AGGTCTTTGA TTCCGTCTTC CATATCTGCA CCGAGATCTC GATCGAGGGC AGGGAAGGAA AACCGGTGGG CACGACCTTT TTGATCGGCG ACACCAAAAA CGTGCTTGCC AAGTCCCGCC AGATCATGCT CAACGCCTTC GAGGGCCATG TCCCCGAGAT GCGCATGGTC ACCAACCCCG ACTTAAAGGA GAACATCAAG GAGTTTGCCC AGCTTGACGG GGCATTCGTG GTCTCGGGCG ACGGGTTCAT CGAGGCTTCG GGACGGTACA TCACGGTGGA TTCAAGCAAG GTGACGCTCC CCAAGGGCAT GGGCACCCGC CACAACTCGG TTGCCGCAAT AACAAGCGTG ACAAGGGCCG TGGGCATCGT GGTCTCCCAG AGTGGCGGCG GGATCACGAT CTTCAAGAAC GGGCTGATTT TGAAGAAGAT CACGCTATGA
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Protein sequence | MISVLFVDDN TEFLAQFRPV LEKTGEMKLE VVASTKQAIE KLKNRAFDVI VCYEDISPVN GIDFVPDMDG VGFLRYLRSM GNPTPVLLFH RKSESRVAFA EVSNGSEIAI PRAADLRSPA ADLLTLIRQA ALRKKAERDI KAQNDQLTAI LSATPLGIFN MKNGIIEWVN HPLTALLGVP ESSIVGKPVR SLFVTEEEYV QVCRDLQIRR DVLGNGCADC ELVRPGGSIL PCTLQARLLD PLDAKKGGTV VVTDISERKK MRDALKESEA KYREMMQNAQ SIIVRMDMQG TITYVNTYAA AFFDYPEAGL VGKNVVGTIA PEKNRGGHDL SMMANDLGFN AEGYAINVSE NIRRNGDIVW IAWINKAIRD PQGHIVEVLC IGHDITDRKR SGEVRISTDT WKDQVVADTD VREEVFDSVF HICTEISIEG REGKPVGTTF LIGDTKNVLA KSRQIMLNAF EGHVPEMRMV TNPDLKENIK EFAQLDGAFV VSGDGFIEAS GRYITVDSSK VTLPKGMGTR HNSVAAITSV TRAVGIVVSQ SGGGITIFKN GLILKKITL
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