| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1596 |
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| Symbol | |
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| ID | 5410910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1665165 |
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| End bp | 1667570 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640868830 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001404756 |
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| Protein GI | 154151138 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.949234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0587091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAT CTGATTTTTT CGAGGTAACG GTCAAAGAGG CGGCGCACAA CGATGCAAGC
CGGGGTATTG CCCGGCTCAG TGTCGATGTG ATGAAAAAAC TCAACCTTGT CTCGGGCGAT
GTCATCGAGA TCGTGGGAAA GAAGAACGCT GCGGCGATTG TCTGGCCGGG CTTTGCCGAG
GACATCGGCT TTGCGATCCT CCGGATAGAC GGGAGCATAC GGGCAAACGC GAATGCCGGC
ATTGACGAGA AGGTGAAGAT CCGCAAATCC GAGGCGGTGT ACGCGACAAA AGTCGTGATC
CAGCCGACCC AGGCCACCCA GCTCGTGGGC GGGGAGCAGT ACCTTTCAAG GGTGCTCCGG
GGTCGCTCGG TGGTAGAGGG CCAGACGCTC CGCGTCGATA TCATCGGGAA CTCCGTCACG
TTCGTGATTG TCCGGGTCTC CCCCCGGGCC ATCGCGATTG TCTCCGATGA CACCGAGATC
GAGCTCAAGA ACGAGCCGTT CAATCCCGAA GAAGGAAAGC GGGAGATCTC CTCCATCCAG
TACGAGGACA TCGGCGGCCT CGAACGCGAG CTCCAGCTGG TGCGCGAGAT GATCGAACTC
CCCCTGCGCC ACCCTGAGCT CTTTGAAAAA CTGGGGATAA AGCCCCCGAA GGGTGTCCTC
TTCTACGGCC CGCCGGGCAC AGGTAAGACC CTGATTGCAA AGGCTGTGGC AAACGAGGTA
GATGCCCACT TCAGCACGCT CTCGGGCCCC GAGATCATGA GCAAGTTCTA CGGGGACAGC
GAAAAAGCCC TGCGGGACAA GTTCCACGAC GCGGAGGAGA ACGCCCCGTC CATCATCTTT
ATTGATGAGA TCGACGCGAT CGCCCCCAAG CGCGAGGACG TGCAGGGAGA GGTGGAGCGC
CGGATCGTGG CACAGCTCCT GGCCCTCATG GACGGCCTTG CCGGGCGGGG ACAGGTCGTA
GTGATTGCGG CAACAAACCT CCCCAACTCC ATTGACCCGG CGCTCCGGCG TGGAGGGAGG
TTTGACCGCG AGATCGAGAT CGGCATTCCG GACAAGAAGG GACGTTTAGA GATCTTCCAG
GTGCACACCC GGGGCGTGCC GCTGGCAAAG GACGTGGATA TCGCCGCCCT TGCCGAGACC
ACGTTTGGGT TTGTGGGCGC CGATATCGCG CTTCTGGTCA AGGAAGCCGC GATGAACGCG
ATCCGGAAGA TCATCCCGCT CATCGACATC AACAAGCAGA TCCCGGCCGA GGTGATTGAG
CAGCTGCGGA TCACAAAAAA CGATTTCGAT ACGGCCCGGA AGATTGTCCA GCCAAGCGCC
CTGCGCGAGG TGCTTATCGA GATCCCGGAT GTGGCATGGG AGGATATTGC CGGGCTTGAC
CAGACCAAGG ATACGCTGAT TAAGATCATC GAGGGGCGCC TGCGGTACCC GAAGATCTTC
GAGAAACTGG ACTACAAGCC CCCCCGGGGG ATCCTCCTCT TTGGTCCGCC CGGGACCGGG
AAAACGCTGC TTGCAAAGGG CATCGCAAGC AAGCGCCAGC TCAACTTCAT CTCGGTCAAG
GGCCCCGAGC TCCTCTCCAA AGGGGTGGGA GATTCCGAGA AGCATGTGAG GGAGGCGTTT
CGCAAGGCCC GCCAGTCGGC GCCCTGTATC ATCTTCTTTG ACGAGATCGA CGCGCTCTTC
CCGAAAAGAG GCACGGTTGC CGACAACACG CACGTGACCG AGAGCGTGCT CTCCCAGTTT
TTGACCGAGC TCGACGGCAT CGAGGAACTC AAGGAGGTCT TTGTGATCGG GGCCACCAAC
CGCCCCGACC TGCTTGACCC GGCCCTGCTC CGTCCCGGCC GGCTCGAAAA ACACCTGTAC
ATTCCCCCGC CGGATGAGGC GGCACGAAAA GCGATCCTTG CCACCTATCT CCGGGGCATT
GAGGGAGTCC TTGACCCGGA CGTGAACACC GGTGAACTTG CCGCACAGAC CCGGTTTTTT
GTGGGCGCTG ATCTCGAAGC GCTGGTAAGA GAGGCAAAGG CGATCGTGAT CGATGAGGTG
ACCGGGGATG GCAGCACCGG GGAGGAGAAG ATACCGGAGA CGGTCCGGAT CACCCGGCAG
CATTTCGATG CTGCGCTGGA ACAGGTCAAG GGCACACTTG ACGGAACGGA CTTCGAACGG
TACGAGCAGA AGTCCTGGGA CCTCCTGTAC GCGAAAAACA GGCGCGAGAT CCTGTACCAG
GCAGTCGGTC TCATCAACCA GGTCGAGTAC CTCAGGGGGA AAACCACGCT TAAAGCCGGG
ATCATAAAAC AGGCCGACGA ACTGCGGGAT CTCGTGTACT GGCAGCGGCG TTCGTTTGAC
GAGATCCGGG AACGTACCGA AAAGCTCCGG AAGGCGCTTG AAGCATGTAC CAAATCTCCG
GATTAA
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| Protein sequence | MAESDFFEVT VKEAAHNDAS RGIARLSVDV MKKLNLVSGD VIEIVGKKNA AAIVWPGFAE
DIGFAILRID GSIRANANAG IDEKVKIRKS EAVYATKVVI QPTQATQLVG GEQYLSRVLR
GRSVVEGQTL RVDIIGNSVT FVIVRVSPRA IAIVSDDTEI ELKNEPFNPE EGKREISSIQ
YEDIGGLERE LQLVREMIEL PLRHPELFEK LGIKPPKGVL FYGPPGTGKT LIAKAVANEV
DAHFSTLSGP EIMSKFYGDS EKALRDKFHD AEENAPSIIF IDEIDAIAPK REDVQGEVER
RIVAQLLALM DGLAGRGQVV VIAATNLPNS IDPALRRGGR FDREIEIGIP DKKGRLEIFQ
VHTRGVPLAK DVDIAALAET TFGFVGADIA LLVKEAAMNA IRKIIPLIDI NKQIPAEVIE
QLRITKNDFD TARKIVQPSA LREVLIEIPD VAWEDIAGLD QTKDTLIKII EGRLRYPKIF
EKLDYKPPRG ILLFGPPGTG KTLLAKGIAS KRQLNFISVK GPELLSKGVG DSEKHVREAF
RKARQSAPCI IFFDEIDALF PKRGTVADNT HVTESVLSQF LTELDGIEEL KEVFVIGATN
RPDLLDPALL RPGRLEKHLY IPPPDEAARK AILATYLRGI EGVLDPDVNT GELAAQTRFF
VGADLEALVR EAKAIVIDEV TGDGSTGEEK IPETVRITRQ HFDAALEQVK GTLDGTDFER
YEQKSWDLLY AKNRREILYQ AVGLINQVEY LRGKTTLKAG IIKQADELRD LVYWQRRSFD
EIRERTEKLR KALEACTKSP D
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