Gene Mboo_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1590 
Symbol 
ID5410904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1659790 
End bp1660497 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content57% 
IMG OID640868824 
Productphosphoribosyltransferase 
Protein accessionYP_001404750 
Protein GI154151132 
COG category[R] General function prediction only 
COG ID[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0798935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCC CCGGTCTCCG CAATCATTAT GTGCAATGGG ATCCAGAGCA ACCGCATATG 
GGGGAGATAC TTGACAATCC CCGGCTCCGG GAACAGAGGT TTGTCTTTTC CGATCGTCAT
GATGCAGGAA GACAACTGGG AGCGCTTTTA AAAACTCTCC CCGCTATCCG CAACCCGCTC
GTTCTTGCCA TTCCTGCAGG TGGTGTGCCG ATCGGAAAAG AGGTTGCAAT CGCTCTCGGT
GCGCCCCTGT CACTGGCGAT TGTAAGAAAG ATCCGGATCC CCGGCAGTAC CGAATCGGGG
TTTGGGGCAA TCACCTGGGA CGGGGAGGTG CTGATCAATG AAGAGCTGCG TGCCGCACTG
GGGATTCAGG CACCCGAAGT CAGACTGGCA ATCGCTCAGA CACGCGAAAA TGTACGTGAC
CGGGTAGCCC GGTTTACCGG AGGAGTGGCG CTTCCTTCAC CCGCCGGGAA AACCGTCATC
CTGACAGACG ACGGCCTTGC GTCGGGGTTT ACGATGCTTG CCGCGATAAA AAGCATCCGC
TTCCGCGAGC CTGCCCGTAT CATTGTCGCT GTTCCTACTG CATCTGCATC AGCTGCCGGG
ATGGTTTCTT TGCTTGCGGA TTACCTGGTC TGCCTCAACA TCCGCAGCAG CCGTACGTTT
GCTGTCGCTG ATGCCTACGA ACAGTGGTAT GATCTGACCG ATCGCTAA
 
Protein sequence
MCAPGLRNHY VQWDPEQPHM GEILDNPRLR EQRFVFSDRH DAGRQLGALL KTLPAIRNPL 
VLAIPAGGVP IGKEVAIALG APLSLAIVRK IRIPGSTESG FGAITWDGEV LINEELRAAL
GIQAPEVRLA IAQTRENVRD RVARFTGGVA LPSPAGKTVI LTDDGLASGF TMLAAIKSIR
FREPARIIVA VPTASASAAG MVSLLADYLV CLNIRSSRTF AVADAYEQWY DLTDR