Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1570 |
Symbol | |
ID | 5410095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1638080 |
End bp | 1638709 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640868804 |
Product | dehydroquinase class I |
Protein accession | YP_001404730 |
Protein GI | 154151112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.251567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG TAGCCTCACT TACCGACCCC TCGCAGGCTG CCACGGCCCA GTCGCAGGGA GCAGACCTCC TTGAGCTCCG CTTTGACCTG ATGGAAGGGG ACCCGGTGGA TATCGCGAGG CGGTGCAGAG CGATCTCGAA GCTCCCTCTT ATTGCCACCT TCCGCTCGGC ACTGGAAGGC GGGCGGTACT TCGGGAGCCC GGAGGAATGG GCCAAAAAGA TCGCCCCGGT CCTCCCGCTA GTGGATTACG TAGATATAGA GCAGCAGTTT GCCCGCAAAT CCGGCCTGGT AAGGGAAGCC GGAAAAGCGA TCATCGCTTC GCACCACACT GCCGAGATGC TCCCGCTCCA TGTCCTTTTT GTGCTCGAAC AGGAGCTCCG GGCGTACGGC GACATTCCCA AGATCATTGT TACCCCGCAT AACGAGGACG AGCTCATCGA TCTCATCGCG TTTACCCGTG CAGCAAAAAA ACCGGTCTGC ACCGGGGTGA TGGGGTCGGC ATTCCGGTAC GCCCGGGCCA TCCTCCCGCT CTTTGGCTCG GAGCTCGCGT ACTGCCATGC CGGGGTGCCT GCCGCAGAAG GGCAGTACTC GGTTGCAGAG TTTGTGGCAT TGATGAAAAT GCTCTCCTGA
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Protein sequence | MQIVASLTDP SQAATAQSQG ADLLELRFDL MEGDPVDIAR RCRAISKLPL IATFRSALEG GRYFGSPEEW AKKIAPVLPL VDYVDIEQQF ARKSGLVREA GKAIIASHHT AEMLPLHVLF VLEQELRAYG DIPKIIVTPH NEDELIDLIA FTRAAKKPVC TGVMGSAFRY ARAILPLFGS ELAYCHAGVP AAEGQYSVAE FVALMKMLS
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