Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1568 |
Symbol | |
ID | 5410093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1636426 |
End bp | 1637064 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868802 |
Product | hypothetical protein |
Protein accession | YP_001404728 |
Protein GI | 154151110 |
COG category | [S] Function unknown |
COG ID | [COG5423] Predicted metal-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.041355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTCG CAGAATCACA TAACAAAAAA TTTGCTTTCC TCGTGGAAGC GGCATGCCGG CTCGGGGCCG CTGACGCAAA GGTGATTCCC GCATCGGACG TAATTGTCGA AAACCGTGTG ACCTTAAAGT GCCGGGCCGG CTGCATCGGG TACGGTAAAA AACTCACCTG TCCGCCGTAC GTCCCAACCC CGGACAATTT CAGAAATATC CTGTCCGAGT ACCGGTACGC CCTGCTTGTG AAATTCATAT CCCCGGCAGA AGCGGAGCCT GACGTGATCT GCTCGATCTA CAAGTACTGG CTTGATCCGA CGGCCCCGGC CGACATGAAG GTAGCAGCAG AAAAATTCTG GAAGGATCAC TTCAACGGCA CCGGATCGTT TGCGCCCATG ATGCTCGAAC TCGAACGCCT CGCATTCAAC GCGGGTAATC CGTTCGCTCT TGCTTTCGTC AATGGCTCGT GCCGGCTCTG CGAGACCTGC AATGTCAAGG GTGGGCTCTG TATCCACCCC ACGCAGGCCC GCATCCCCGA GCACGCTGTG GGCATAAACA TGGTCGCAAC CGCGGCAAAA GCGAAAATGC CGATAACATT CCCGGTCAAA GGGCACCCTG AGCTCATGGC GCTCCTTCTT ATCGATTAA
|
Protein sequence | MELAESHNKK FAFLVEAACR LGAADAKVIP ASDVIVENRV TLKCRAGCIG YGKKLTCPPY VPTPDNFRNI LSEYRYALLV KFISPAEAEP DVICSIYKYW LDPTAPADMK VAAEKFWKDH FNGTGSFAPM MLELERLAFN AGNPFALAFV NGSCRLCETC NVKGGLCIHP TQARIPEHAV GINMVATAAK AKMPITFPVK GHPELMALLL ID
|
| |