Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1567 |
Symbol | |
ID | 5410092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1635694 |
End bp | 1636302 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640868801 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001404727 |
Protein GI | 154151109 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.246189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGGG TCGTCCCGGA GTACAAGGAA GATGCAAAGC GCCGGATCAT TGCTGCGGCA ATCGATGTGA TCGCACAACG CGGCTGCGAA GGTATGACTG TTGACGATGT GGCAAAAAAG ATCGGTGTGA CCAAGGGCGC GGTCTACTGG TATTTCCCAA GCAAGGAAGA ACTCATGACC GCGGTGCTCG ACTCGCTCCA GGCAGAGATC AGACAGGTCA CGTACGAATC CTTCTACAAC CGGCCTGCCG AAGACCTGCT CATGCAGATC TTCGACCGTT TTGCTGTTGT CGACCCAAAG AAGCGGGTGG TGTTTTTTGA TATGCTCACC CTCGCAAACC GGAACTCGCA GGTGCGGCAT GCCATTCGGG AATATTACGA CGGGCTTGTC GCGACCTTCG AGAGTGCAGT CACCCGGGAA AAGAAGAAAA AATTCATCCA GACGCAGGCA GATCCACACC ACCTCGCCCT GATGCTTGCT GCCCTCTACT CCGGGCTCCA GAACTACGAC ATGCTCATGA TGCATCAGGA CGAACTCAGG GAGCTCTGGA GGGAAGGGGT CAGGATCCTG CTAAAGTCCT CGTATTCGGG AACGTACGGT GAGAAATGA
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Protein sequence | MPRVVPEYKE DAKRRIIAAA IDVIAQRGCE GMTVDDVAKK IGVTKGAVYW YFPSKEELMT AVLDSLQAEI RQVTYESFYN RPAEDLLMQI FDRFAVVDPK KRVVFFDMLT LANRNSQVRH AIREYYDGLV ATFESAVTRE KKKKFIQTQA DPHHLALMLA ALYSGLQNYD MLMMHQDELR ELWREGVRIL LKSSYSGTYG EK
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