| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1567 |
|---|
| Symbol | |
|---|
| ID | 5410092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1635694 |
|---|
| End bp | 1636302 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868801 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001404727 |
|---|
| Protein GI | 154151109 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.246189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGGG TCGTCCCGGA GTACAAGGAA GATGCAAAGC GCCGGATCAT TGCTGCGGCA
ATCGATGTGA TCGCACAACG CGGCTGCGAA GGTATGACTG TTGACGATGT GGCAAAAAAG
ATCGGTGTGA CCAAGGGCGC GGTCTACTGG TATTTCCCAA GCAAGGAAGA ACTCATGACC
GCGGTGCTCG ACTCGCTCCA GGCAGAGATC AGACAGGTCA CGTACGAATC CTTCTACAAC
CGGCCTGCCG AAGACCTGCT CATGCAGATC TTCGACCGTT TTGCTGTTGT CGACCCAAAG
AAGCGGGTGG TGTTTTTTGA TATGCTCACC CTCGCAAACC GGAACTCGCA GGTGCGGCAT
GCCATTCGGG AATATTACGA CGGGCTTGTC GCGACCTTCG AGAGTGCAGT CACCCGGGAA
AAGAAGAAAA AATTCATCCA GACGCAGGCA GATCCACACC ACCTCGCCCT GATGCTTGCT
GCCCTCTACT CCGGGCTCCA GAACTACGAC ATGCTCATGA TGCATCAGGA CGAACTCAGG
GAGCTCTGGA GGGAAGGGGT CAGGATCCTG CTAAAGTCCT CGTATTCGGG AACGTACGGT
GAGAAATGA
|
|---|
| Protein sequence | MPRVVPEYKE DAKRRIIAAA IDVIAQRGCE GMTVDDVAKK IGVTKGAVYW YFPSKEELMT
AVLDSLQAEI RQVTYESFYN RPAEDLLMQI FDRFAVVDPK KRVVFFDMLT LANRNSQVRH
AIREYYDGLV ATFESAVTRE KKKKFIQTQA DPHHLALMLA ALYSGLQNYD MLMMHQDELR
ELWREGVRIL LKSSYSGTYG EK
|
|---|
| |