| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1562 |
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| Symbol | |
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| ID | 5410087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1629659 |
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| End bp | 1630924 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868796 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001404722 |
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| Protein GI | 154151104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGTCA CCCTCCCGGC CCGGAGCGGG ATCGAACTTT CCGTCACCAC CCCGCCCTCC
AAGAGTTACA CTCACCGCGC CCTGATAGCA GCAGCGCTTG CACAAGGGAG AAGCACGATT
GTCCGCCCGC TCATGGCCGA TGACACAAAA CTCACCATTG CATCGCTCAT GAAACTCGGT
GTTGCGATCC ACGCCGACCA GCACAATATC ATGCTGGAAG GCTGCGATGG ATCCTTCCCA
AATACACCGG GAACAGTGCT TGACCTGGAT AACTCCGGCA CCTCGCTGCG CCTGCTTGCC
TCGGCAGCCC TGCTCGCCAC TTACCCGGTC ACGCTCACCG GCAGCGCCCG GATGCAGGAG
CGCCCGCTCG GGCCCCTTGC CCACACGCTT AACGACCTCG GGGGAATGGT CATCTTCACC
AAAAAAGAGG GCTATCCCCC GGTCACCATC GGGGGCCGGC TCCTTGGCGG GACTGCCACA
ATTGACGGCT CGCAGAGCAG TCAGTTTGCC TCCTCGGTCA TGATGGCGGC ACCGTATTCA
AAAGGCCCGG TGGACCTGAC CGTTACAGGG ACTCCTGCGT CGCAGTCGTA CCTCGACATC
ACGGCCGGGG TTATGACGGA CTTTGGCGCC GTGATCCGGC GCGAGGGCTA CAGGCGGTTT
TTGGTCAGCA ACTGCAACCA TTACACCGGG CGCACGTTTG TTGTTGAAGG GGACTACTCC
TCTGCCTCGT ACTTCTTTGC GCTTGCTGCG ATCTGCGGGG GCAAAGTGAC CGTAGCCGGC
CTTGCCCCGG ACTCTGTGCA GGGTGACCGG CTTTTCCTTG ATGCACTCCA GCGGATGGGC
TGCGAGGTGA CCTATGCCCA CGATGGGGTT ACCGTGGAAA ACCAGGGCCC GCTTACCGGG
ATCACGATCA ATATGTCCTC GGCTCCCGAC ACGGTCCAGA CACTCTGCAT GGTGGCGGCA
GTGGCAAGGA CACCAACGAT CATCACCGGC ATCGGCCACC TGAAGTTCAA AGAGAGCGAC
CGGATCGCAG TCACCGCGGA CCGGCTCAGG ATGCTGGGCG GTATTGTAAC CGCAGAAAGA
GACCGTATCG TAATCCAGCC GGCTACCCTG CACGGCGGGA GGATCGACCC GGTAAACGAC
CACCGGACCG CGATGAGCTT TGCCGTGCTC GGCCTTGGGA TCGGCGGGAT CACGATCACC
GGTGCAGAAT GCGTAAACAA GTCCTTCCCC GGTTTTTGGG AAATACTCTC GAAGGTGATG
GAATGA
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| Protein sequence | MIVTLPARSG IELSVTTPPS KSYTHRALIA AALAQGRSTI VRPLMADDTK LTIASLMKLG
VAIHADQHNI MLEGCDGSFP NTPGTVLDLD NSGTSLRLLA SAALLATYPV TLTGSARMQE
RPLGPLAHTL NDLGGMVIFT KKEGYPPVTI GGRLLGGTAT IDGSQSSQFA SSVMMAAPYS
KGPVDLTVTG TPASQSYLDI TAGVMTDFGA VIRREGYRRF LVSNCNHYTG RTFVVEGDYS
SASYFFALAA ICGGKVTVAG LAPDSVQGDR LFLDALQRMG CEVTYAHDGV TVENQGPLTG
ITINMSSAPD TVQTLCMVAA VARTPTIITG IGHLKFKESD RIAVTADRLR MLGGIVTAER
DRIVIQPATL HGGRIDPVND HRTAMSFAVL GLGIGGITIT GAECVNKSFP GFWEILSKVM
E
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