| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1558 |
|---|
| Symbol | |
|---|
| ID | 5411245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1626272 |
|---|
| End bp | 1627054 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640868792 |
|---|
| Product | fructose-bisphosphate aldolase |
|---|
| Protein accession | YP_001404718 |
|---|
| Protein GI | 154151100 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01949] predicted phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGAA AAGATATCAG GATCGAACGG ATCATTGACC GGAACACGGG ACGGGCCGTG
ATCATTCCCA TGGACCACGG TTTTTCCATG GGCCAGATTG ACGGCCTGCT GGACATGACC
AAAGTGATCA CAGACGTGAG CGAGGGCGGC GCAAACGCGA TCGTGCTCCA CAAGGGCATG
GTCAAGCGCG GCCACCGCAA GCACGGCAGG GACATCGGGC TGATTGTGCA CCTCTCGGGC
AGTACCTCGC TCAACCCGGA CCCGAATGAC AAGGTGCTGG TCTGCACGGT CGAAGAGGCA
ATCGCGCTCG GCGCTGATGC GGTCTCTATC CACATCAATC TCGGTGCGCC CAATGAATCC
AAGATGCTCG AAGACGGTGC AAGGATCGTC CGGGACTGCA ACCGCTGGGG CATGCCGCTT
CTCGTGATGA TCTACCCGAG GGGCAAAGGC ATCGACCCGT CATCCCCGCA GACCGTGGGC
CACTGTGTAC GCGTGGCTGA AGAGCTCGGC GCTGACTTAA TCAAGACCAC GTACCCGGGC
AGCCCCGAGG CATTTGCACG GATCACGAAA GCCTGCTCGG TGCCGGTCTT TGTGGCAGGC
GGCGAAAAGT GCAGCGACCT TGAATCGTTG GAGATGATCC GGGACTCGGT TGCTGCCGGC
GGTGCGGGCG TTTGCATGGG ACGAAACGCG TTCCAGCGCG AAAACACCCG TGCGTTTGTC
CACTCCATCT GCCGCGTTGT CCATCACAAC GTTGATCCAA AGAAGGCGCT GGAGCAGCCG
TAA
|
|---|
| Protein sequence | MIGKDIRIER IIDRNTGRAV IIPMDHGFSM GQIDGLLDMT KVITDVSEGG ANAIVLHKGM
VKRGHRKHGR DIGLIVHLSG STSLNPDPND KVLVCTVEEA IALGADAVSI HINLGAPNES
KMLEDGARIV RDCNRWGMPL LVMIYPRGKG IDPSSPQTVG HCVRVAEELG ADLIKTTYPG
SPEAFARITK ACSVPVFVAG GEKCSDLESL EMIRDSVAAG GAGVCMGRNA FQRENTRAFV
HSICRVVHHN VDPKKALEQP
|
|---|
| |