Gene Mboo_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1556 
Symbol 
ID5411243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1624548 
End bp1625012 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID640868790 
Productribonuclease H 
Protein accessionYP_001404716 
Protein GI154151098 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCT CGTTCATGGT AATGTCTGGT TCTCATTCAG AAAAGTCCGC CTCTCCCACC 
CTTACGGTGT ATACTGATGG GGCCTCGCGG GGAAATCCGG GGCTCGCGGC ATACGGGTTC
ATCTTTGTCA GGAATAATGA GATTATCTTT GAAGAAGCCA GAACGATCGG AACGGCCACC
AATAATACTG CTGAATATTA CGCGATCCTG TCGGCACTAA AAAAGGCAAC TGAATTTGCC
AGTGAATCAA TACTTGTCTA TTCCGACAGC GAGCTCGTGA TAAAGCAGAT CAATAACCAG
TACCGTATCA CAAAACCACA TCTTGCCCAG CTCCGGGCAG AACTTGCGCT CTTAGAAAAA
AATTTTACTG ATCTTCATTT CCGGAATGTA CCCCGGGAAA ATATTTTTAT CCGGCGTTGT
GATGAACTCT GCAATCGGGC TTTGGACCGG GAAACGGAGG TGTGA
 
Protein sequence
MLLSFMVMSG SHSEKSASPT LTVYTDGASR GNPGLAAYGF IFVRNNEIIF EEARTIGTAT 
NNTAEYYAIL SALKKATEFA SESILVYSDS ELVIKQINNQ YRITKPHLAQ LRAELALLEK
NFTDLHFRNV PRENIFIRRC DELCNRALDR ETEV