Gene Mboo_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1540 
Symbol 
ID5410656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1612181 
End bp1613368 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content56% 
IMG OID640868774 
Productphosphoglycerate kinase 
Protein accessionYP_001404700 
Protein GI154151082 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0574001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA AGACGGTGGA GGATGAAGAG GTATATGGGA AACGGGTGCT CGTGAGGGCT 
GATTTCAATG TGCCCATGGA CCGGAACGGT ACGATCGAAG ACGACACCCG GATCCGGGCC
TGTCTTCCCA CGATCACCTA TCTGATCGAT CACCGGGCCC GGATCATCCT CTGCTCCCAT
CTCGGCAGGC CGCAGGGCAG GGTAGATGGG CACCTGAGAC TGGAGCCGGT AGCGCGGCGA
CTGTCAGAAC TCTTGCAAAG GCCGGTCAAG CCGCTCAGGG AGGCGATCGG ACCCGAAGTT
GAGCGGGCTG TATCCGGCAT GGAAAACGGC GAGATCATCC TCCTGGAAAA CCTGAGGTTC
TACCCGGGCG ATGAAGAGAA CGATCCCGGT TTTGCCCGTG AACTTGCCAG TCTGGCGGAT
CTCTTTGTTA ACGATGCCTT TGGCGCAAGC CACCGGGCAC ACGCATCGGT TGTAGGACTG
GCAGCGTATC TTCCCTGCGT AGCCGGTCTC CTAATGGAAA AGGAGATCGA GAGACTCGGC
AGTCTTCTTG AGAACCCCAG GAGGCCTTTT GCAGCCATCA TGGGCGGGGC AAAAGTGGAG
GAGAAGATCG GAATTCTGGA AAATATCATT TCCAAAGTGG ATCTCATCCT TATCGGGGGC
GGGATGAGTG CCACGTTTTT AAAGGGCCAG GGCTGGGATG CGGGAATCTC TCCTGTGGAA
CCGGACAAGA TGGAAATAGT CAGGGCGATT ATGCAGAAAG CAGGAGCCCT TGGTGTAAGG
ATCCTGCTTC CACAGGATGT AATTGTCACG GAAAAACTAA AAACCGGTGC CATTGCCCGG
GGGGTGAGCG CACAGCAGAT CCCCGCCGAT AGCATAATAG CGGATATCGG GCCCCAGACC
ATTACGGAGT TTACAAAAGA GCTCAAAAAC TGCCGGACTG TGGTATGGAA CGGGCCGATG
GGGGTCTTTG AGATCCCGCA GTTTTCCGAA GGGACAAAAT CCATTGCCAC GGCTCTTGCA
GATCTCCATG CTATGACGAT AGTCGGGGGT GGTTCAACGG CCGAGGCCGT GACAAAGCTC
GGGCTTTCCG GCAAAATGAC CCATGTCTCA ACCGGCGGAG GAGCAACCCT CCTGTTCCTC
TCGGGAAAGA TACTGCCCGG GATAGCGGTC CTGGCGGACA AGGAGTGA
 
Protein sequence
MQKKTVEDEE VYGKRVLVRA DFNVPMDRNG TIEDDTRIRA CLPTITYLID HRARIILCSH 
LGRPQGRVDG HLRLEPVARR LSELLQRPVK PLREAIGPEV ERAVSGMENG EIILLENLRF
YPGDEENDPG FARELASLAD LFVNDAFGAS HRAHASVVGL AAYLPCVAGL LMEKEIERLG
SLLENPRRPF AAIMGGAKVE EKIGILENII SKVDLILIGG GMSATFLKGQ GWDAGISPVE
PDKMEIVRAI MQKAGALGVR ILLPQDVIVT EKLKTGAIAR GVSAQQIPAD SIIADIGPQT
ITEFTKELKN CRTVVWNGPM GVFEIPQFSE GTKSIATALA DLHAMTIVGG GSTAEAVTKL
GLSGKMTHVS TGGGATLLFL SGKILPGIAV LADKE