Gene Mboo_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1539 
Symbol 
ID5410655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1610907 
End bp1611983 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID640868773 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001404699 
Protein GI154151081 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.31269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TCTCCCCGTA CGTTTTAGGT GACCTCGTGC TTGCAAACCG GATGATAATG 
GCGCCGATGA CCCGGTGCCG CGCCATCGAC TGCAATGTCC CGGGTCCGCT CTCGGTCATA
TACTATGTCC AGCGGGCAGC GGCCGGTCTC ATCATCACTG AAGGTTCCCA GGTCAGCCCG
CAGGGCGTGG GGTTTATCCG GACGCCCGGG ATTTATTCGG ATGAGCAGGT TGCCGGCTGG
AAGAAGGTAA CTTCTGCCGT CCACCAGGCC GGGGGAAAGA TGTTTATCCA GCTCTGGCAC
GTGGGCCGCG TGTCGCACCC GGATTTTCTC GACGGTGGCC TCCCGGTTGC GCCCTCTGCC
CTCCCGGTCA ACGAGGTGAT TCACACGCCC TTGGGAAAGA TGATGATCCC CATCCCACGG
GCGCTCGGGC TTACGGAGAT CCCAAAGATC GTGCATGAGT TCCAGGACGC CGCAGCCTAT
GCCAAAGAGG CGGGGTTTGA CGGCGTCGAG ATCCATGGGG CAAACGGGTA CCTGCTGGAC
CAGTTCCTGC GGGACGGTTC AAACCATCGT ACCGACCGGT ACGGGGGAAG CCTTGCAAAC
CGGGCACGTC TTCCCATAGA GATAACAGAA GCGGTAGTTG CGGTCTGGGG TGCAAAAAAG
GTAGGCTACC GGATCTCGCC GCACTTCAAC CTCCATGCAA TGTCGGACAC GCACCCCCGG
GAAACTTTCG GGCACCTGGC AGACCGGCTC AGTAAACTCG GCATCGCGTA CATTCACCTT
GTTGAACCGG TCGGCGGCAA ACTGGGGGAG GTAAGCCCGG ATGCGCAGAT GGCCCCGCTC
ATCCGCAAGA AATTCGACGG GGCCCTGATC CTGAACGGGG GGTACGACAA AGAGAGCGCA
ACCCGGGTAA TTGAAGACGG CCTTGCAGAC CTTGTGGCAT TTGGCACCCT GTTCCTTGCA
AACCCGGATC TTCCCGAGCG TTTCAAGAGA GGTGCACCGC TGAACACGGA AGACCCGGCA
ACGTTCTATA CCGGTGAGGA AAAGGGGTAC ACGGATTACC CTGCACTGGG AAAGTAA
 
Protein sequence
MSLFSPYVLG DLVLANRMIM APMTRCRAID CNVPGPLSVI YYVQRAAAGL IITEGSQVSP 
QGVGFIRTPG IYSDEQVAGW KKVTSAVHQA GGKMFIQLWH VGRVSHPDFL DGGLPVAPSA
LPVNEVIHTP LGKMMIPIPR ALGLTEIPKI VHEFQDAAAY AKEAGFDGVE IHGANGYLLD
QFLRDGSNHR TDRYGGSLAN RARLPIEITE AVVAVWGAKK VGYRISPHFN LHAMSDTHPR
ETFGHLADRL SKLGIAYIHL VEPVGGKLGE VSPDAQMAPL IRKKFDGALI LNGGYDKESA
TRVIEDGLAD LVAFGTLFLA NPDLPERFKR GAPLNTEDPA TFYTGEEKGY TDYPALGK