| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1527 |
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| Symbol | |
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| ID | 5411930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1596336 |
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| End bp | 1600019 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640868762 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001404688 |
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| Protein GI | 154151070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.823974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG TACCGGCCCC CCTTACCACT GCTGACGGCA TACCCGGGAT GAAGGATGCA
GACTTTTTAA GAAAAACTAC CTGCGCCTTC GCCATTCTTG CCATTGCGAT CTGCATCGCA
GGCATCCTCG GAAATATATC CGGCAGTCTC ATCCTGAGCA GTGTATGCAG AGGGTGCAAG
ACCCTTGCGC TGAGTGCTGC ACTCATATGG ATCTTTTTTG GCGCCCTCCT TCTCCTGTTG
TCCGCACGGC AGGCCGGGCG TACCGTGCGG ATCCTGGTAC AGGCAATCCT GGTTTTTATT
TTCGGCCTGG AATGCATTGA GATTGCATTC AGCCTGAACG GAGCGCAGTT TATCGTTGAA
TCATGGTCGG TTCAGGCAGG ATCGGAGCTT TTTGGATCGC TGTCAACGCC GATATCCCCC
ATAGCCTCCG GCCTCATCGC CATAGCTGCA GCCGGGCTGT TTTTCTGCAC CGATCCTTCC
CTCCTGTCAC CTTCGCGCCT CAGGGCACGG GAGATCACGG TCATAAGCGG GGGCATCCTC
ACGCTTATGG GGTTTGCGCT CGCCTTAAGT TACCTGTTTG GGACACCGCT TATCCTTGCA
AAAGCGATCA TCCCCATTGC AGCTGCCTCT GCCCTTGCTG CGTTTTTTAT CGGCCTGGGG
CTCATTGCCG CTGCAGGACC TTTCACGGTT CCCGTCTGTT ATTTTATGGG AAATTCCATC
AGGGCGCGGC TGTTGAGGAC CTTTGTCTCC TTAAGTGTAG CAATAACGCT CTGTGAAACC
ATCCTTTTTT ACGTCATTTC TGCATGGCTT GGTATCTCCA ATGAGATCAT GATCTCGGCA
AGCCTTGTCC TCTTTATCGT CGTTACCTCG GTTATCGTCG GCCGGGTATC GGAGATGATC
GGCCAGACCC TTGACAAAAA AGAGCAGGAA CTTGCAGACA AAAATGCATA TCTCGGAGAA
CTTAATGACA ACCTGGTATC CGCAGAAGAG AAACTAAGGC AGACGATCGA GACCCTCATC
AAAAACGAGC GGGACCTCCA CGAAAGCGAA CAATTCCTCC GGGAAACCGA GAAGATTGCA
AAGATCGGCG GGTGGAAGGC CAACCCAAAG ACCGATTATC TCCAGGTGAG CGAAGGGGTT
TATGACATCT TCGGGATCCC GGGGCATCAC CGGCCGGGAT TCTCCGAAGG CCTGAACTGT
TTTTCCCGGG AGGATCAGAT CCTTATCCGC GAAAGTATTG AAACGTGCCT TGCCACCGGT
AAGCCGTTTA CCCATGAGAT CAGGATCACC ACCGGGACAA ATGAGGAGGT CTGGACGGAG
ATCAGGGGGC TTGCTTTGGT CAGGGAGGGG CACCTGTCCT CGGTTATCGG GACCATCCAG
GATATCTCAC GGCGCCGGAA GGTTGAAGAA ATGCTCAAAC GGGAGAGCGG GAAACTGGAC
ATACTTGCAG AATCCGCCCG GCTCCTCCTT GGTTCCGAAA AACCCGGGCA CGTTGTCCAG
CGCATAGGGG AACGGGTAAT GCAGTTCCTT TCCTGCCAGG TCTTTTTCAA TTATCTTATC
GATGAAACCG GCCAGCGGAT GGAACTCAAC GCTTATGCCG GTATTGCACA GGAGGACGCA
GAGCAGATCC GGTACCTTAA CCTGGGAGAT GCAGTCTGTG GCAGGGTGGC CCGCGACAGC
AAGCGGATGG TAATTTATGA TATTCTCAGC ACCGATGACG AAAAAACACG CCTGGTCCGG
TCCCTGGGCA TTTCCGGGTA TGCATGCCAC CCGCTTATCT TCCAGGGCCG CACCCTTGGG
ACGATCTCCT TTGGCACCGC TGACCGGGCC TGTTTTAGCG AGGATGAACT GGACCTGATG
CAGTCAGTGA CGGCCCTTGT GGCTACTGCG ATGGCGCAAA AGCAGATCGC AGATACTCTC
AAAAGCACAA GCCAGTACCT GGAGAGCCTG ATAAATTACG CCAATGCACC GATCATTGTC
TGGGACCCGG ACTACCGGAT CCTGCGGTTC AACCACGCAT TTGAGTTCCT GACGGGATTT
TCTGCGGACG AGATCATCGG AAAGCCGCTC GATATCCTGT TCCCGGAAAA ATCCCGCCGG
GATTCCATGG AACTCATAAG GAGGACCAGT GGAGGGGAAC GCTGGGAATC GGTGGAGATC
CCGGTCATGC ATGTTTCCGG CTCTGTAAAA ATGGTCCTGT GGAACTCTGC AAACGTATAC
GATCCCGACG GTGCGGCCAT AGTCTCCACC ATAGCGCAGG GTCAGGATAT CACGGAGCGT
AAGAACGCAG AAGAGACTGC CAGACAAACT GCATCGTTAC TCAGGGCAGC CCTCGATTCC
ACCGGTGACG GCATCCTTGT AGTCGACAAT GCACGAACCA TTACCGGCTA TAACAAGAAA
TTCTGTGCCA TCTGGGGCAT CCCCGAACCT GTGCTCGATG ATTGTGCCCG CGAGGCAATC
GCGCTTGTTT CCATGGCACG GCAGGTAGTA GATGCAAAAG AGTTTACCGG CCACCTCAAC
GACCTGTACA ACCACCCGGG GCGGGAGAGT TATGATACGG TAAAGCTGAA GGATGGCAGG
ATCTTCGAGA GGTACTCGCT GCCCCAGAAG ATCGGCGACA CCATTGTCGG CCGTGTGTGG
AGCTACCGTG ACATTACCGA GCGCAGGCAG GCTGAGATCG CCCTGCAGGA AAGCCTGGAG
AAATTCCGGG TCATTGCAAC GAGCACGCCG GACCATATCC TGGTGCAGGA CAAAAATCTC
CGGTATACCC AGGTCATCAA TCCCCAGCCG GGACTTACCG GGCAGGATAT GATCGGGAAA
ACCGATTACG AGATTCTCTC AAGAGAAGAG GCAGACACCC TGACAACGAT CAAGAAGCAG
GTTCTTGAGA CCGGTAGCGC AGTCAGCAGT GAAATGCACC TGACAAACGC ACGGGGCGAG
AAAAACTACT TTTCCGGGGC ATATGTTCCT ACAAGGAATG AAGCAGGGGA GGTTGACGGC
CTTATCGGGT ATTTCCGGAA CGTGACCGAA AAGAAACAGG CCAATGAAAA GATCCTTGCA
GCGCTTGCGG AAAAAGAGGT CCTGATCCGG GAGATCCACC ACCGGGTGAA AAACAACCTC
CAGATCGTTA CCGGCCTCCT TGATATGACA AGGACACGGG CCCAGGACCC TGAGACCACC
GGTATCCTCA CGGACATGAT GCTGAAGATC AAGACTATGG CCCGTATCCA CACCCGTTTG
TACGAGAGCA ACCAGTCCGG CCAGGTCAGC ATGGACGGCC AGATCCGGGA TATGGTAACC
GATCTCTCCG GCATCTACCT GCCTTCCTCT CCCGGCATCA GGTGCGAGGT GGATGCAGAA
GAGTTCTCCC TCCCGGTCGA TCTTGCAATC CCCTGTGCGC TGGTCATTAA CGAGATCCTT
TCCAACTCGT TCAAACATGC CTTCAGGGAG CGCACCCACG GGACGATACG GGTACTGGCA
CACCGGACGG GCGAACAGGT CCATATCAGT ATCCGGGATG ACGGGACAGG CATCCCGGAA
CAGGTGGATC CGGAGCGTAC GGCAAGCCTT GGCCTCAAGC TGATACGCAA CCTGGTAAAT
CAGTTACAGG GAACGCTTAC TATTGGAAGC CCCGAAGAGG GTACAGAAGT CACGATCGAT
TTTCCCGCAA AAACGGGAGG ATAA
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| Protein sequence | MMTVPAPLTT ADGIPGMKDA DFLRKTTCAF AILAIAICIA GILGNISGSL ILSSVCRGCK
TLALSAALIW IFFGALLLLL SARQAGRTVR ILVQAILVFI FGLECIEIAF SLNGAQFIVE
SWSVQAGSEL FGSLSTPISP IASGLIAIAA AGLFFCTDPS LLSPSRLRAR EITVISGGIL
TLMGFALALS YLFGTPLILA KAIIPIAAAS ALAAFFIGLG LIAAAGPFTV PVCYFMGNSI
RARLLRTFVS LSVAITLCET ILFYVISAWL GISNEIMISA SLVLFIVVTS VIVGRVSEMI
GQTLDKKEQE LADKNAYLGE LNDNLVSAEE KLRQTIETLI KNERDLHESE QFLRETEKIA
KIGGWKANPK TDYLQVSEGV YDIFGIPGHH RPGFSEGLNC FSREDQILIR ESIETCLATG
KPFTHEIRIT TGTNEEVWTE IRGLALVREG HLSSVIGTIQ DISRRRKVEE MLKRESGKLD
ILAESARLLL GSEKPGHVVQ RIGERVMQFL SCQVFFNYLI DETGQRMELN AYAGIAQEDA
EQIRYLNLGD AVCGRVARDS KRMVIYDILS TDDEKTRLVR SLGISGYACH PLIFQGRTLG
TISFGTADRA CFSEDELDLM QSVTALVATA MAQKQIADTL KSTSQYLESL INYANAPIIV
WDPDYRILRF NHAFEFLTGF SADEIIGKPL DILFPEKSRR DSMELIRRTS GGERWESVEI
PVMHVSGSVK MVLWNSANVY DPDGAAIVST IAQGQDITER KNAEETARQT ASLLRAALDS
TGDGILVVDN ARTITGYNKK FCAIWGIPEP VLDDCAREAI ALVSMARQVV DAKEFTGHLN
DLYNHPGRES YDTVKLKDGR IFERYSLPQK IGDTIVGRVW SYRDITERRQ AEIALQESLE
KFRVIATSTP DHILVQDKNL RYTQVINPQP GLTGQDMIGK TDYEILSREE ADTLTTIKKQ
VLETGSAVSS EMHLTNARGE KNYFSGAYVP TRNEAGEVDG LIGYFRNVTE KKQANEKILA
ALAEKEVLIR EIHHRVKNNL QIVTGLLDMT RTRAQDPETT GILTDMMLKI KTMARIHTRL
YESNQSGQVS MDGQIRDMVT DLSGIYLPSS PGIRCEVDAE EFSLPVDLAI PCALVINEIL
SNSFKHAFRE RTHGTIRVLA HRTGEQVHIS IRDDGTGIPE QVDPERTASL GLKLIRNLVN
QLQGTLTIGS PEEGTEVTID FPAKTGG
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