Gene Mboo_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1524 
Symbol 
ID5411927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1590591 
End bp1591730 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID640868759 
Productglycosyl transferase, group 1 
Protein accessionYP_001404685 
Protein GI154151067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.986628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.661565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCAC TCAAAATAGC CATGTTCTGC TGGGAATCGC TCTATGCCGA ACGTGTGGGC 
GGTCTTGCCC CGGCTGCAAC GCATCTGGCC GAGACCCTGG CAGAACATCA CGAGGTGCAT
TTTTTCACCC GTGGCCAGGT GCCGGACCAG ACAATCAACA ATGTCAGCTA CCATTACTGC
CGGCCGGAAG GCGCAAACAT CGTGGAGTAC TGCAACAGCA TGAGCCTGTT GATGGTGGAA
AATTTCCACC GGTTCGATAC CGGCAGGAGA TTCGATATCC TGCACTTCCA TGACTGGCAT
CCCGTGCAGG CGCTCCACCT CCTCAAGGAC CGGAACACCA TCCTCACGTT CCATTCCACG
GAATACGGCA GGAGCGGCAA CCATTTTGGC GACTGGTGGG AATTTAAGGA GATCTCCGGC
AAGGAATGGT ATGGCGGGCT TATTGCAAAG CGCGTGACAG CGGTTTCTGC CACGCTCAAA
CAGGAGGTCA TGGCGCTCTA CAACATTCCC GAAGGGAAAT GCGACGTAGT GCCAAACGGT
ATCGTGCCGC GGCAGTACCG GGCAGAGATC AACGCAGCGG AAGTAAAGCA GTCCTATGGG
ATCCCGGCAT CTGACCCGCT TATCCTTTTT ATCGGCAGGC TGGCCTACCA GAAGGGCCCG
GACATTCTTA TCGGGGCAAT TAAAACCGTC TGCCGTGAGC ACCGGGATGC AAAACTGATT
GTTGCCGGCG AGGGAGACAT GCGGCAGGTA CTGGTGGAGC AGGCATCAGA TCTCCCGGTA
AATTTTATCG GGTATATCCC GGATTCCGAA TACATCCGGC TCCTGAACGC CTGCGATCTC
GTGGTCATCC CGAGCAGGAA CGAACCGTTT GGCCTTGTGC TGCTCGAAGC ATGGAGTGCG
GAAAAAGGGG TGGTAGCATC CAACGTTGGC GGGCTTTCGG AAAATATTGA TTCGTTTGTC
GATGGCGTCA AGGTGGAGCC GCAGGCAGAA ACCCTTGCCG AAGGAATCAG TGCCGTTATC
GGCGAGCCGC AGCAGGCAGG AGCACTCGGG AAACAGGGGA GGAAAAAGAT CGACCGCCTG
TTCCTGTGGG GCCCGATCGG CGGGAAGATG ACAGAAACGT ATTCCCGGGT GGTTGCATGA
 
Protein sequence
MESLKIAMFC WESLYAERVG GLAPAATHLA ETLAEHHEVH FFTRGQVPDQ TINNVSYHYC 
RPEGANIVEY CNSMSLLMVE NFHRFDTGRR FDILHFHDWH PVQALHLLKD RNTILTFHST
EYGRSGNHFG DWWEFKEISG KEWYGGLIAK RVTAVSATLK QEVMALYNIP EGKCDVVPNG
IVPRQYRAEI NAAEVKQSYG IPASDPLILF IGRLAYQKGP DILIGAIKTV CREHRDAKLI
VAGEGDMRQV LVEQASDLPV NFIGYIPDSE YIRLLNACDL VVIPSRNEPF GLVLLEAWSA
EKGVVASNVG GLSENIDSFV DGVKVEPQAE TLAEGISAVI GEPQQAGALG KQGRKKIDRL
FLWGPIGGKM TETYSRVVA