| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1522 |
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| Symbol | |
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| ID | 5411925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1587630 |
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| End bp | 1589327 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640868757 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_001404683 |
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| Protein GI | 154151065 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.644798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAGT ACGGGCGGGA GGTCCGGGTT CCCGGGACCG CCCGGCAGCT TGAATTTCTC
ATGGCCTCAT CCCATGCGTA CGCGTCCTCG TCCGTGGGCG GTAACACGAG AAAATACCAT
GGGCTTTTTG TCCGGGACGC ACGTGTGCTC CTTGCCGGGC TCGACGAACG GGTAAACGGT
GTCCCGCTCT CCGCACAGCA GTACGAGGGT GCACCGGATG AAGGGGGGCT CCGGTACCTT
GCGGGGTTCT GTGCCTATCC TCCGTCGTGG CAGTACTGGA TCGACGATAG TGTCGTACAA
AAGACGATCG CGTTTAACGG GAGCCTTTCG GTCACGTACG CTATTTCGGG CGATGCAGAA
CTGTGGGTCC GCCCTCTCAT CACCGACCGG CCGGTGCATT CCGTTATGAA AAATCCTGTC
CCGGACTGCA CCCGGGAACC CGGCGGGTTC CGGTGGGCCG GTCTTTTTTT TGGCGGGGAT
CTTCCGTACG GGGCAGACCC GGTCACCTAC CGGAACGTGT GGTACCAGCG GGAGTACGAA
CGGGGGTACG AACCGGTGGA AGATCTCTTT TCCCCGGGAG TTTTCCAGGG CCGCGTACGG
GATGCTACGG TCCTGTTCCG GTGCACCGGG GACGCATGCG ATCCCCCGGG CCCGCCCCGT
CCGCGGTCGC CGCAGTCCCT GCCCGGCTGG CTGGACCGGG CAGCGGATGT ATTCTGCAGG
GGTGAGGAGA TCGTTGCCGG TTACCCCTGG TTCTGCGAAT CATGGGGGCG CGATTCGGCG
ATCAGTGTGA CCGGCCTGCT CATTGAACCC GGGAGACGGG ACGAGGCCCG GGCCGTGCTC
AGGCGGCTTT CTTCCCTGAT GCGGGACGGC GTTGTCCCAA ACAGGGTTCC GGATAATTAC
CACGCGAGCG ATGCCTCGCT GTGGTTTATT TATGCCCTCA CCCGGTACCG GCGCTCCTTT
GGGGACGATC CCTTCATGGG GGAGATGAAG CCGGTGATCG AAACGATTCT TGCGGAATAT
CCCTCATCCC CTGTTGCCCG GCTGGATCAT GACCTGATCG CTGTTGCTCC CGGGAGCACG
TGGATGGATA CTGCGTTTAC ACCCCGAGCG GGAAAACCGG TGGAGATCAA TGCGCTCTGG
GTACATGCCC TTGCAGAAGC GGAGGCCCAG GGGATCCCGG TGCCGGTGAG TTCCGCATCG
GCACAGAGAG CGTTCCGGCA GTTCTGGAAC GAGGAAAAGA AGTGCCTGTA CGATGTGATT
GACCCGATCG ATCCCTCTGT CAGGCCAAAC CAGGTAATTG CGATCGCCCT TGGCCTGGTC
AGTACGGAAC AGGCAGAATC TGCACTTGGT ACGGTCTCCC GGGAACTCCT GACACCGTAC
GGGCTTCGCA CGCTCTCGCG ATCGGATCCC GGCTACCAGG GCCGGTACAC CGGCGACCGC
AGTTATCATA ACGGCTGCGT CTGGCCGTGG CTCACCGGCT TTTTCTGTGA AGCGCTCATC
AGAAACGGCG TCCCCCGGGA GCGGGCAGCA CAGATCCTCA TACCGATCCT TGCTCACGGG
CGGGAGGCGG GGATCGGGTA CATCTCCGAG ATTTTTGATG GCGATCCGCC GTTTTTTCCC
AACGGGTGCA TTGCCCAGGC ATGGAGCGTG GCAGAGGTTG GTCGGGCGTA CCGGATGGCG
AGGAGAGATC CGTTTTAA
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| Protein sequence | MFQYGREVRV PGTARQLEFL MASSHAYASS SVGGNTRKYH GLFVRDARVL LAGLDERVNG
VPLSAQQYEG APDEGGLRYL AGFCAYPPSW QYWIDDSVVQ KTIAFNGSLS VTYAISGDAE
LWVRPLITDR PVHSVMKNPV PDCTREPGGF RWAGLFFGGD LPYGADPVTY RNVWYQREYE
RGYEPVEDLF SPGVFQGRVR DATVLFRCTG DACDPPGPPR PRSPQSLPGW LDRAADVFCR
GEEIVAGYPW FCESWGRDSA ISVTGLLIEP GRRDEARAVL RRLSSLMRDG VVPNRVPDNY
HASDASLWFI YALTRYRRSF GDDPFMGEMK PVIETILAEY PSSPVARLDH DLIAVAPGST
WMDTAFTPRA GKPVEINALW VHALAEAEAQ GIPVPVSSAS AQRAFRQFWN EEKKCLYDVI
DPIDPSVRPN QVIAIALGLV STEQAESALG TVSRELLTPY GLRTLSRSDP GYQGRYTGDR
SYHNGCVWPW LTGFFCEALI RNGVPRERAA QILIPILAHG REAGIGYISE IFDGDPPFFP
NGCIAQAWSV AEVGRAYRMA RRDPF
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