| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1520 |
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| Symbol | |
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| ID | 5412050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1582441 |
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| End bp | 1586418 |
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| Gene Length | 3978 bp |
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| Protein Length | 1325 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868755 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001404681 |
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| Protein GI | 154151063 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.120961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCG TTGATGTTGT CACGTCAGCC TCCGGGGCCC TTTCCCGTAT GGAGTCAACA
AGCTATGACG CCCTTATCGC CGACTACCAG ATGCCAGAGA TGGATGGTAT AGAATTTCTC
AAACAGGTAA GAAGTTCCGG TAACCGCATC CCTTTCATTC TCTTCACCGG GCGGGGCCGG
GAAGAGATTG TCATCCAGGC ATTAAACGAA GGGGCGGATT TTTATCTCCA GAAAGGGGGA
GCACCGCAGG CACAGTTTGC CGAACTTCAG TCCAAAATTT TACAATCAAT ATACCGCAGG
CAGGCAGAAG AGAGGGTGGT GTATCTCAGC CGGATCAATT CCCTGCTCAG CCAGGTCAAC
AAGAACATTG TCCATATCCC GACCCGCAAT GAACTTTTCA AAGCGATCTG TGCCGTTGCA
ATAGAGTACG GGAAATTCCA GATGGCCTGG ATCGGGACAA TCGACAGGAA GTCCCGGAGG
ATCAATCCCG TTGCATCAGC TGGTATGGGC ACCAGGGAAT ATCTTTCCCA CGTGGCCCTT
TTGGCAGATG ATATTCCCGA AGGACGAGGG CCTACGGGAC GAGCCGTAAG GGAGGGCAGG
CCGGTAGTTA CAAACGATAT CCGACAGGAT CCGGCAATGA TCCTGTGGCA TGAGACCGCA
GAAAAGTTTG GTTATCGCTC ATCAGGCGCC TTCCCGATCT GTTGCAGGGG TGAGGTGATC
GGTGCATTTT CTCTGTATGC TTCAGAACCT GAATTTTTCT CTCCCGAGGA AGTGGCACTC
CTCGAAGAAG TTGCAGAGGA GATCTCGTTT GCACTCGATA ACCTGGAACG GGAAAAAGAA
CGTTTTGCAG CGGTCGAAGC CCTCGCCCGG AGCGAAGAGC GCCTGAAGTT TGCACTTGAA
GGCGCCAATG ACGGCCTGTG GGACGTATGG ATGGAGACCG GGGAGGTGTA CCTGAGCCCC
CGGGGATGCG AGATCCTCGG GTACACACCG GAGGAACTGC CCGAGATCGC CAGAGTGTGG
AACGACCTGG TGTACCCTGA CGATCTTCCC CGGACCCGGG CAGAACTGGA TGCCTATCTT
GAAGGGCGCA CGGACATTTT CTCGATCGAA CAGCGCCTGG TAACCAAAAC CGGGGAGCCG
AAATGGATCC TAACCCGGGG AAAGGCCTCC GTCCGTAACG ATCAGGGCAG GGTACTGCGG
ATGACCGGGA CGCACTCGGA TATAACGGAG CAGAAAAAAG CCGAGAATGA ACTGCGGACG
GCAAACGAGC ACCTCACTGC ATTGGAAGAG GAAATCCGGG CACAGTATGA TGCGCTTGCA
GAACACCAGA AAGCGCTGGC GACATCTGAA GAAAAATACC GGAGTGTCCT CAACAACATC
CAGGACATGT TTTACCGGAG TGATCGCTTG GGGAACCTGA TCATGGCAAG CCCGAGCTGC
CTTAAGACGC TTGGCTATGA TTCCTTTGAC GAGATATTAA ACAAACCCAT ATCAGAGACG
TTCTACTATT TCCCGGAAAA ACGTAAGGAA TTGCTTTTGC ACCTTGACGA AAAAGGATCC
GTTGAGGATT ACGAGGTCCC GTTGAAACGC AGGGATGGCA GTATAATCTG GACCTCAACA
AACAGCCATT ATTACCGGGA TGGAACCGGT GCAATTGCAG GTGTCGAGGG GATTTTCCGG
GATATTACCC TGCGCAAATC CTATGAGGAA GCATTGAAAC GTGAGGCCGC CCAGCTCGAC
CAAATCATCA ACCTTGTTCC CCATATGATC TTTGCGACTG ACCCGGCCGG GAATTTTCTG
CTGGTAAATC AGGCTGTTGC CCGGAGTTAT AACAAAAGTG TTTCCGAAAT TGTAGGAAAA
CCCCAGGCCG ACTTCCAGAG GGACGCAGCG GAACTCCGGC GTATGCTCGA TGACAACCGT
GAAGTCATCA CTTCAGGAAC GTCCAGATTT ATTCCGGAGG AAACCTTCAC CGACGCGTTC
GGAAAAAAGC ATTATCTCCA GACTACCAAA GTCCCCTTCA CCACACTTGG AAACAACCAG
AAGGCTGTAC TCGGGGTTGC CATCGATATA ACCGAACGGA AGCGTATCGA AGAAGAACTC
CTCAGGAAGA ACGAGGCGCT GGCTGCCTCC TATGAGCAGC TTACCGCAAC AGAAGAAGAA
CTTCGTTTTA ATTTCGATGA ATTGATCCAG CGGGAACAGG CACTAAAAGA GAGCGAGGAA
CGGTACCGGA ATGTAGTTGA GGACCAGACC GAATTTATCT CCCGGTGTCA ACCGGATGGC
GTCCATGTTT TTGCCAATGA GGCCTACAGC CGCTATTACG GTAGGAAACG TGACGATATT
GTAGGTCATC GGTTCCGGCC TGATATCCCG GTTGAAGACA AGGAGCGTGT GAAACAGTTT
TTTGCATCAT TAACACCGGA CCACCCGGTT GATGTCATTG AACACCGGGT CATTATGCCT
GATGGAACCT TGCGATGGCA ACAGTGGACG GATCGTGCAA TTTTCAATTC TTCCGGGGAG
GTTACTGAAT ACCAGTCGGT AGGCCGGGAC ATTACCGAAC GGAAACTGGA GGAGCAGGCG
CTGCAGGAAA ATGAACAACG CCTGACTTCG ATTTATAATA CGGTCGGGGA TTCCATCTTT
CAGCTGGCTG TTGAATCTCA TGGGCAGTAT CGCTTTACCT CAGTCAATTC GGCCTTTTGC
AGGACCACAG GATTGCCTCC CGGGCAGGTG ATCGGTAAGA ACGTAAACGA GATCATCCCC
GAACCTTCAC TCTTATTGGT TCTGGAAAAA TACCGGCAGG CTGTCGAAAA AAAGGCCATT
GTCCGTTGGG AGGAAACGTC CCATTACCCG AGCGGGCAAC TTACCGGAGA GGTCAGTATC
GCGCCTATCT TTGATCAGGC AGGTAATTGC ACATACCTTA TCGGGTCCGT GCATGACATC
ACTGAACGCA AGCACGCAGA AGAGGAACTG CGGGAACGAA ATTCCCTGAT GCGTGCACTC
ATCGATAACC TCCCGTTTGA TACGTGGGCC ATGGATCGTT CGGGCCAATA TATCCTGCAG
AACCTGGTTT CGATCAAAAA CTGGGGAGAT AGTATCGGCA AAACCCCCGG CCAGATCCAT
CTTCGTAACG ATCTGCTCGA AAAATGGCAG GAGAATAACA GGAAAGCGTT TGAAGGAACT
GTCGTAAGAG ATGAGTTGTC CGTATCCTCC AAAAACGGGG TGCGGATATA TGATGAGATC
ATTGCCCCCA TCCGGTCAGG TGATGTCATA ACCGGGATCA TCGGAGTAAA TATTGACATC
ACCGAACGAA AACAGGCTCA TGAGGCACAG CTCCTGGCAA CTAAGAAGCT CAAGCTCCTG
ACAAGCATCA CCCGCCATGA TATCAACAAC CAGATCCTCG CTTTGCAGAG TTACCTTGCC
CTGATGGAAA TGAAACGGCC CGATCCTGCA TTTGATGAGT ATTTCCGGAA AACCAGAATT
GCTGCAGAGC GCATATCTGC AATGATCCAG TTCACCAAAG AATACGAGGT GATCGGCATG
AAAAACCCCG GCTGGGAAAA CTGTCGCACA CTTGTCGAGA CTGCGGCGAC ACAGGTTCCC
CTTGCAAACA TCAGGCTGGA AAACGATATT CCTGCCGGAA CTAAGGTATT CGCCGATCCA
CTGATTGTCA GGGTCTTTTA CAACCTGATG GATAATGCAG TCCGGTACGG AAAGACAATT
ACGACAATAC GGTTCTCTGT AAGGAAATCC GACGATGGTC TTGTTATCCT GTGCGAGGAT
GACGGGAAGG GCGTCCCGGC AGACGAAAAA GAGAAGATCT TTGAGCGCGG GTTTGGGAAG
AACACCGGAC TCGGGCTTTT CCTTTCCCGG GAAATTCTTT CAATCACCGG TATTACAATC
CAGGAAACCG GGGAGCCGGG AAAAGGAGCA CGGTTTGAGA TTATCGTACC TCAGGGATCC
TTCCGCAGCC GGGGTTAA
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| Protein sequence | MFSVDVVTSA SGALSRMEST SYDALIADYQ MPEMDGIEFL KQVRSSGNRI PFILFTGRGR
EEIVIQALNE GADFYLQKGG APQAQFAELQ SKILQSIYRR QAEERVVYLS RINSLLSQVN
KNIVHIPTRN ELFKAICAVA IEYGKFQMAW IGTIDRKSRR INPVASAGMG TREYLSHVAL
LADDIPEGRG PTGRAVREGR PVVTNDIRQD PAMILWHETA EKFGYRSSGA FPICCRGEVI
GAFSLYASEP EFFSPEEVAL LEEVAEEISF ALDNLEREKE RFAAVEALAR SEERLKFALE
GANDGLWDVW METGEVYLSP RGCEILGYTP EELPEIARVW NDLVYPDDLP RTRAELDAYL
EGRTDIFSIE QRLVTKTGEP KWILTRGKAS VRNDQGRVLR MTGTHSDITE QKKAENELRT
ANEHLTALEE EIRAQYDALA EHQKALATSE EKYRSVLNNI QDMFYRSDRL GNLIMASPSC
LKTLGYDSFD EILNKPISET FYYFPEKRKE LLLHLDEKGS VEDYEVPLKR RDGSIIWTST
NSHYYRDGTG AIAGVEGIFR DITLRKSYEE ALKREAAQLD QIINLVPHMI FATDPAGNFL
LVNQAVARSY NKSVSEIVGK PQADFQRDAA ELRRMLDDNR EVITSGTSRF IPEETFTDAF
GKKHYLQTTK VPFTTLGNNQ KAVLGVAIDI TERKRIEEEL LRKNEALAAS YEQLTATEEE
LRFNFDELIQ REQALKESEE RYRNVVEDQT EFISRCQPDG VHVFANEAYS RYYGRKRDDI
VGHRFRPDIP VEDKERVKQF FASLTPDHPV DVIEHRVIMP DGTLRWQQWT DRAIFNSSGE
VTEYQSVGRD ITERKLEEQA LQENEQRLTS IYNTVGDSIF QLAVESHGQY RFTSVNSAFC
RTTGLPPGQV IGKNVNEIIP EPSLLLVLEK YRQAVEKKAI VRWEETSHYP SGQLTGEVSI
APIFDQAGNC TYLIGSVHDI TERKHAEEEL RERNSLMRAL IDNLPFDTWA MDRSGQYILQ
NLVSIKNWGD SIGKTPGQIH LRNDLLEKWQ ENNRKAFEGT VVRDELSVSS KNGVRIYDEI
IAPIRSGDVI TGIIGVNIDI TERKQAHEAQ LLATKKLKLL TSITRHDINN QILALQSYLA
LMEMKRPDPA FDEYFRKTRI AAERISAMIQ FTKEYEVIGM KNPGWENCRT LVETAATQVP
LANIRLENDI PAGTKVFADP LIVRVFYNLM DNAVRYGKTI TTIRFSVRKS DDGLVILCED
DGKGVPADEK EKIFERGFGK NTGLGLFLSR EILSITGITI QETGEPGKGA RFEIIVPQGS
FRSRG
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