| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1516 |
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| Symbol | |
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| ID | 5412046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1575779 |
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| End bp | 1579396 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640868751 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001404677 |
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| Protein GI | 154151059 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0460264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTG ATACCCGGAA AATACTGTCG CTGCTGCTTA TCCCGGTCTA TCTTATTCTT
ATTGGGGTTT TCCTGGCCGC AAATAGTAAT GCCTCATTCA ATCCTCCCAT CCTGCTCCTG
TTGTTTAACA CGCTCTTCCT TGGCCTGATC CCCCTTTATG TTGCGTATGT TGCGTACATG
TCTTTCCGGA GCAGCGGATC AACCGGCGTA CTGCTGAAAG GGACCGGCAT GCTGGTGCTT
GGCCTTGGGG CAATCGCTGC CGGCATCATC AACTACCTGC CGGATTCCAT GAATGCCAAC
ATCACCGTCC AGAACACCAG TTTTTGTGCC GGTGCCCTTC TCCAGCTCAT CGGGATTCTC
ATAGCGCTCT CCGGGACGGT ACCACAACAG AGATCTGACG ACGGGCTCAA ATGTACCCTC
CTCTATGGCG GATCCGGTAT TATCGTCTTT TTCTTTTCCC TTGCTGCCGT AACCGGGGTA
ATCCCTCCGT TTTTTATTCC GGGCGTGGGC TTTACGCCGT TACGGGAGGT TCTTATCGCC
AGTGCAGTTG AATTTTTCGC ACTGGCAGCC GGGATTCTCC TCTGGCTGTA TTACCGGGAG
CGGGAGGATT TTTTCTTCTG GTACTCGATC GGTCTTGCCC TGATCGGGAT TGGTCTTGTC
GCGGTTCATT TTCCGTCAGT GCTCGGCAGT CCGCTGGGCT GGGTTGGCAG GTCAGCCCAG
TATCTCGGGG GAGTCTACAT CCTCATCGCG TTTATTGCCC TTGGGCGGAG CGCCCGCCGG
ACAGGCATCC CGGCAGGAGA TATGCTCTCC CGGTTTTTTG GTGAAGCCGA AACGAGTTAC
CGGGCCCTCA TTGAGACCGC AACCGACGCC ATTGTGGTTT TTGATTCGGC CGACCAGGTG
ATCGTATGGA ACCGGGCGGC AGAGAGGATG TTTGGGTATA CGCCCGCTGA AGCAACCGGG
TCGTCTTTTT TCCGGATGGT AATACCGGAC GAATTTACCC CTATCATAAA AAACAATTTC
CGGGGCCCGG TCCCTCCCCC CGCGGATCCG GCCCTGCAAA AACCCGTGGA GATCACCGCC
CGGTGCAAAG ACGGGAGCAC GTTTCCTGTA GAACTGGCGT TGTCCCGGCA CATGGTAGGA
GATACCCGGG TAAGCACCTG CATCATCCGT GACCTTACCG AACGCAGGAA GGCAGACGAT
GCGTTGCAGA ATAACATCCG GCTCCTCGAA GATGTGATGG AAGGCAGTAC TTCTCCCATC
TTCCTTAAAG ATCTCGGGGG CAGGTTCATT TCAGTCAATT CGGCTTTGGA GAGAATACTG
GGAAAATCAC GGCAGGAACT CAAAGGCAAA ACCGATTATG ACATTGCTCC AAAGGAGGTT
GCTGATTCCT GGCGGTCTCA CGACAAAAAA GTAATCGATA CCGGTAAGGC AATCCAGGTT
GAAGAGGCGG CGGATCTCCC GGACCGTCAG TATACCTTCC TTGCAAACAA GTTTCCTCTC
GTGGACGCCC ATGGCCGGAT ATATGGCGTA GGTTCCATCT CCCACGATAT CACCGAACGC
AAGAAGGCAG AAGAAGCCTT ACGGGAGAGC GAAGAGCGCT TCCGCTCGGT CATGGATAAT
TCCCCCGTTG TTATTTTTCG ATTAAACCTC CAGACGAAAA GATATGAATA CTTCAGTCCT
GCATGTGGTT CGATCTATGG GTATTCACCG CAGGAGATGA TCAAAATGAG TGCCAACGAC
ACAAGGAGTC GTGTGCACCC GGATGACCTG TCGCGGTTCG ATGCAGCGAA CACCCGCATA
GAGGAAGAAG GAAATGGCGG GTACGAAGTC CGCTGGCTGA AAAGTTCAGG AGAGTACCGC
TGGCTCTCGC TGAAGATAAA TATCATGAAT GACGCAACCG GCCTTCCCCT GTACCGTAAC
GGTTTTGTGA GTGATGTCAC CGAACGAAGG AACGCAGAAG AGGCACTCTT AAAAAAGAAT
GCGGATCTCG AAATTCTCAA CGAAGAACTC AATACTGCAC AGGAAGAGCT GCAACAGCAC
ATAGGCGAAC TCACCCGTGC CGAAGCAAAA CTCAGGGAAA GCGAGGCGCG GTACCGCACC
CTGTTCGAGA CCATGGCCGA AGGATTCTCT ATCAACGAGA TCATCCTTGA TGACAAGGGT
ATGCCCGTTG ATCTCAGGTA CCTGAGCGTC AACCCGGCGT TCGAAATCCA GACCGGCCTT
AAGGCCGGAG ATATCATTGG CAGGACCACC CTCGAGCTTT TCCCCGGTGC CGAGCCGGTC
TGGTTTGAGC GGTACGGGGA CGTTGTTCTT ACCGGAAAAC CTGCGCACTT TGAGGAAAAG
TTCGGCCCGC TTGGAAGGTG GTTCGACTGC GTTGCATATA AGATGGATAA GATGCAGTTT
GCCGTCATCT TTATCGATAT CACGGAACGC AGGCAGATGG AGGAAAAGCT CCAGATCACG
CTGCAGCGCT TTTACCGGAT TCTTTCAAAT ATGCAGTATG GCATCCTGCT GGTCACAGAC
GAGAACCGGA CAGAATTTGC CAACCAGGCC TTCTGCGATA TGTTTGGCCT GGAAGATACT
CCCGCGGCCC TGTCCCATCT GTCAGCGGAG GAAATGCTTG AAAAAATCCG GCCCGCGTAT
AAAGATCCCG ACGCGGCAAT AACCCGTATC AATGAAATAG TTGACCTTGG GCAACCGGTA
ACAGATGAAG ATGTGAATAT GCGTGGCGGA CGGACTTTCC TGCGGGCGTT TACACCGATT
ATCGTCAAGG GAATGCCCTA TGGCCGGCTC TGGGTCCATG TGGATATAAC CCGGCGCAAG
GATGCAGAGA GGGAGATCGT GCAGAAAAAC GAGGATCTCA ATACTGCCTG CGAAGAGATT
GCCTCAAAGG AAGAAGAACT CCGGCAGAAC CTTGAAGAAC TCAGCCTCCG CGAGCACGAG
CTGATCAAAA GCGCAGCCAA TCTCGAAGGA GCCCTTGCAG AAAAGGAGGC GCTCTTATCG
GAGATCCATC ATCGCGTCAA GAACAACCTG ACCTCGTTTA TTTCCCTTTT GAGTCTTGAT
GGCTCGTATG AAGAGACTGA TGCGGGGAGG GCCTTAAGAA AAGATCTCCA GAACCGGGCC
CGGAGCATGG CCCTGATCCA CGAGACCCTG TACCGGACAG GGAAATTCTC GACCGTGGAT
ATGAAGGTGT ACCTCAGTAA TCTTCTCAGC CAGGTTGCCG CCAGTTACAA GGAGAGTGCA
AAGATCCGGA TCGTTACGGA GATAAACGAA GTGTCCCTTG ATCTTGCCCG GGCAACCACT
GCCGGCCTTA TCATCAACGA GCTGGTAACA AACTCGTTCA AGTATGCCTT CCCTCCGGGG
TTCGACTGCA TGGCTGTAAG AAAAGAACCC TGTACGATCC GGGTTGCGCT TTACCGCGAG
GATGGGACAG ATGTACTTAT CGTGGCCGAT AATGGTTGCG GGCTGCCGGA GGGACTTGAT
CCCATGGCAA CAAAATCGCT TGGCCTCAAA CTGGTAAACT TCCTTGCCTG CCACCAGCTC
CGGGCCAACA TCGAAGTCCG GGCTGACAGG GGCACGGAGT TTATTTTCAG ACTTAAAGAT
ACAGAGGAGC ACGCATGA
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| Protein sequence | MTPDTRKILS LLLIPVYLIL IGVFLAANSN ASFNPPILLL LFNTLFLGLI PLYVAYVAYM
SFRSSGSTGV LLKGTGMLVL GLGAIAAGII NYLPDSMNAN ITVQNTSFCA GALLQLIGIL
IALSGTVPQQ RSDDGLKCTL LYGGSGIIVF FFSLAAVTGV IPPFFIPGVG FTPLREVLIA
SAVEFFALAA GILLWLYYRE REDFFFWYSI GLALIGIGLV AVHFPSVLGS PLGWVGRSAQ
YLGGVYILIA FIALGRSARR TGIPAGDMLS RFFGEAETSY RALIETATDA IVVFDSADQV
IVWNRAAERM FGYTPAEATG SSFFRMVIPD EFTPIIKNNF RGPVPPPADP ALQKPVEITA
RCKDGSTFPV ELALSRHMVG DTRVSTCIIR DLTERRKADD ALQNNIRLLE DVMEGSTSPI
FLKDLGGRFI SVNSALERIL GKSRQELKGK TDYDIAPKEV ADSWRSHDKK VIDTGKAIQV
EEAADLPDRQ YTFLANKFPL VDAHGRIYGV GSISHDITER KKAEEALRES EERFRSVMDN
SPVVIFRLNL QTKRYEYFSP ACGSIYGYSP QEMIKMSAND TRSRVHPDDL SRFDAANTRI
EEEGNGGYEV RWLKSSGEYR WLSLKINIMN DATGLPLYRN GFVSDVTERR NAEEALLKKN
ADLEILNEEL NTAQEELQQH IGELTRAEAK LRESEARYRT LFETMAEGFS INEIILDDKG
MPVDLRYLSV NPAFEIQTGL KAGDIIGRTT LELFPGAEPV WFERYGDVVL TGKPAHFEEK
FGPLGRWFDC VAYKMDKMQF AVIFIDITER RQMEEKLQIT LQRFYRILSN MQYGILLVTD
ENRTEFANQA FCDMFGLEDT PAALSHLSAE EMLEKIRPAY KDPDAAITRI NEIVDLGQPV
TDEDVNMRGG RTFLRAFTPI IVKGMPYGRL WVHVDITRRK DAEREIVQKN EDLNTACEEI
ASKEEELRQN LEELSLREHE LIKSAANLEG ALAEKEALLS EIHHRVKNNL TSFISLLSLD
GSYEETDAGR ALRKDLQNRA RSMALIHETL YRTGKFSTVD MKVYLSNLLS QVAASYKESA
KIRIVTEINE VSLDLARATT AGLIINELVT NSFKYAFPPG FDCMAVRKEP CTIRVALYRE
DGTDVLIVAD NGCGLPEGLD PMATKSLGLK LVNFLACHQL RANIEVRADR GTEFIFRLKD
TEEHA
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