| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1514 |
|---|
| Symbol | |
|---|
| ID | 5412044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1574461 |
|---|
| End bp | 1574925 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640868749 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | YP_001404675 |
|---|
| Protein GI | 154151057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0212174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACG AGAATCTTTT TATCAGTATC GATTTTGACA AGGGGAATTT CCCAAAGAAG
CATACCTGTG ATGGCGAGGA TATATCCCCG CTGATCCACA TCGATCGCAT CCATTCCCCG
TACCTTGCGG TCATTATCGA TGACCGGATC GGGCCCTCCG AACGCTTTAC CCACTGGCTG
ATGTGGGATT TCGAAGCACG GCAGGTCATA CCGGAAAACA TTCCCAAGAG CGCATTGATT
ACCCTGCCCT TTACTGCGGT CCAGGGGACA AACGATTTCG GCTCAACCGG GTACCGGGGC
CCCTGTCCGC CTCCCGGGGA GGTACATACC TACTATTTCA ACGTGTACGG CCTTGACGCG
TTACTGGGAA TTCCCGCAGG TTCAAAGCGG GATGCCCTTG AGAACGCGAT GAAGGGGCAT
ACGCTCCAGT ACGGCGGCCA GGCCATTGCA ACATACAGCC GGTAA
|
|---|
| Protein sequence | MENENLFISI DFDKGNFPKK HTCDGEDISP LIHIDRIHSP YLAVIIDDRI GPSERFTHWL
MWDFEARQVI PENIPKSALI TLPFTAVQGT NDFGSTGYRG PCPPPGEVHT YYFNVYGLDA
LLGIPAGSKR DALENAMKGH TLQYGGQAIA TYSR
|
|---|
| |