Gene Mboo_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1503 
Symbol 
ID5410877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1566558 
End bp1567175 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content51% 
IMG OID640868738 
Productsuperoxide dismutase 
Protein accessionYP_001404664 
Protein GI154151046 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0226275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG ACAAGTTCTA TACATTACCC AAGCTGCCGT ACGACTATGG GGCCTTAAAA 
CCCTATATTT CCGAAGAACA ACTCAAGCTG CACCACCAGA AACATCACCA GGCCTATGTC
AACGGGGCAA ACGCCATCTA TGAGAAGTTC GACAAGGCAC GCAAAGAGAA CGCGGACTTC
GACGTCAAGG CAACGCTCAA GGAGTTGTCG TTCCACCTTG GGGGATTCAA ACTCCACAAC
CTGTTCTGGG AGAACCTTGC GCCCGCGGGA AAAGGCGGGG GAGGAATGCC AAAAGGGGCC
CTTGCCGAAG CACTCGATGC TGAGTTCGGG AAGTTTGACC GGTTCAAAAA GGAATTTACC
CAGGCTGCAA CCGGTGCCGA AGGATCGGGA TGGGCCGCAC TGACCTTCTG CAAAAAGACC
GGCCGGCCGC TTATCATGCA GATAGAGAAG CACAACACGA ATGTCTTTCC CGGTTTTGGT
ATCATCATGG TCCTTGATGT CTGGGAGCAT GCGTATTATC TCGATTACAA GAACGATCGG
GCAAAATTTG TGGATGCATT CTGGAACATT GTAAACTGGG ATGAGATCGC CAAGCGGTTT
GACCATATCC GGAAATGA
 
Protein sequence
MEADKFYTLP KLPYDYGALK PYISEEQLKL HHQKHHQAYV NGANAIYEKF DKARKENADF 
DVKATLKELS FHLGGFKLHN LFWENLAPAG KGGGGMPKGA LAEALDAEFG KFDRFKKEFT
QAATGAEGSG WAALTFCKKT GRPLIMQIEK HNTNVFPGFG IIMVLDVWEH AYYLDYKNDR
AKFVDAFWNI VNWDEIAKRF DHIRK