Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1500 |
Symbol | |
ID | 5410874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1557549 |
End bp | 1559597 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640868735 |
Product | type II secretion system protein E |
Protein accession | YP_001404661 |
Protein GI | 154151043 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0597313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0634104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCACG ACGAGATAAG CACCCTTCTT AAAAAAATCC ATGGGATACA GACGCCGGAA GATGGAACAG CCGGCCCGGC TGCCTCACCC CGACCGGAAC CTGTGGTCGA GAGTATTGAA GATGATACCC TAACCTCCTT ATATTCCCGG GAAAAAACCG CAATAACAAA AGAGGTATCC AAAAAGACGT CTGCCGATAC GGTTCCTGGT GATACCGATG AGCGGATCAT CTCTGTTGAC CAGATCTTCG ATCTCCCGGA TCTTATCCTC CCAAAAGGTG CAACATTCCG GATCGATGAG ATCAAACTTC ATGGCAGCTT TAACGCCTTT GAGCGCTCCG GGATCGGAAT CCTGCCCGGG GAGGTTGCAG ATATATGGAA GCGGGAATTT TCAAACGCAG GGTTCAGGGA TCTCGAAACA AAACAGTTCC CTGAACAGGA AACGTCAAAA AAATCTTCGG CAAAGAAATC CGGACTGGCA GCACTTTTCA GCAGCGTCCT GCATTCCGCA ACTGTGGACT ATGATCCCAG ATTACATGGC CCCCTTGTAG ATCTCTCATT TGAACCAAGA CCCGGCATTG AAGAGATGGA GATGTATCCC ATCAATGCCC CCTATGCATA TGTCCGCGTC ATCTATGATC ACTCAACGCA TGAATACACG TACCAGATGA TAGAACCCGT TCTTTCCGCA TCCGAAAAAG ATCAGTTAGT GGAATTAAAA GAACGCCTCT CAGACACTCT CGATATCAAC ACCAATGATG TTTCCAAAGA GGAGGCGCAG CGCCTGTTCA GGAAGTCTGT GGATGATATC CTGGCAGATT TCGGGATCAG GCTCAGCCCG GTCGAGCGTG AGAAGATCCT CTATAACCTG CACAAGGATT TTCTGGGTGA TGGCCAGATC GATGCGATCA TGCATGACAA GTACATCGAG GATATTTCCT GCGATGGTGT CAATGTTCCC TTATTTGCAT TCCATGCCGG TTACGAATCG ATGCAGACTA CGCTGATGTA CCATAATGCC GAGGAACTCG ATTCATTTGT CACGAAACTT GCCCAGCGTT CCGGCAAGTA CATCTCCATT GCGGAACCCA TCCTCGATGC GACCATGGGC GATGGTTCCC GTATCCAGAT GACCCTTGGG CAGGAGGTAA CCGCTCACGG CTCAACATTT ACCATCCGCA AGTTCAAGGA TGAGCCGATC ACCCCGGTAG ATCTTATCGA ATGGCACACG TTTTCCCCGC TTTCGGTTGC CTATATCTGG CTTGCCGTCG AGAATGGCAA ATCCGCTCTT TTCGCCGGGG GAACCGCATC CGGTAAGACC ACAGCATTAA ACGCGATCTC TCTTTTTATT CCCCCGATGG CAAAGATCGT CAGCCTTGAA GACACACGGG AATTGAAGCT TCCCCACCCC AACTGGATCC CGAGTATAAC GCGGGAGTCG TTTGATATGA AAGGACGCGG AGAGATCAAC ATGTACGAAC TCCTGCGTGC GGCCATGCGG CAGCGACCTG AGTATATTGT TGTAGGGGAA GTCCGTGGCA AGGAATGCCA GACGCTCTTC CAGGCGATGA GCACCGGCCA TGTCACGTAC TCTACGATCC ACGCGGACTC GGTGTCAAGC ATCGTCCACC GCATCGAGAA CCCGCCCATG GATGTGCCAC GGAATATGTT CTCGGCACTC GATTTTGTCT GCATCCAAGT GCAGGTCCAG ATGGGAGGCA AACGTATCCG TCGGAATAAG CGGATCGTTG AGATCATCGG GATCGACCCA CGGACAAACG AACTGATCAC AAACGAGGTT TTCAAATGGC GGTCGGCAAC CGATGAAATT ACCTATTCGG GGAAGTCCTA CATCCTTGAA GAGATCATGG AGGCCCGTGG CTGGAACGAG AACCAGATGC GGGAGGAACT CAAGCGCCGG CAGGAAGTGC TGGAGTGGAT GCGCATCAAA AAGATCCGGA ATTACAAGGA GGTCGCCAAG CTCCTCATCT CCTATTACCG TGAACCCGAC GCCATTATAG AACGCGTAAG GAAGGACCTG TATGAGTAA
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Protein sequence | MAHDEISTLL KKIHGIQTPE DGTAGPAASP RPEPVVESIE DDTLTSLYSR EKTAITKEVS KKTSADTVPG DTDERIISVD QIFDLPDLIL PKGATFRIDE IKLHGSFNAF ERSGIGILPG EVADIWKREF SNAGFRDLET KQFPEQETSK KSSAKKSGLA ALFSSVLHSA TVDYDPRLHG PLVDLSFEPR PGIEEMEMYP INAPYAYVRV IYDHSTHEYT YQMIEPVLSA SEKDQLVELK ERLSDTLDIN TNDVSKEEAQ RLFRKSVDDI LADFGIRLSP VEREKILYNL HKDFLGDGQI DAIMHDKYIE DISCDGVNVP LFAFHAGYES MQTTLMYHNA EELDSFVTKL AQRSGKYISI AEPILDATMG DGSRIQMTLG QEVTAHGSTF TIRKFKDEPI TPVDLIEWHT FSPLSVAYIW LAVENGKSAL FAGGTASGKT TALNAISLFI PPMAKIVSLE DTRELKLPHP NWIPSITRES FDMKGRGEIN MYELLRAAMR QRPEYIVVGE VRGKECQTLF QAMSTGHVTY STIHADSVSS IVHRIENPPM DVPRNMFSAL DFVCIQVQVQ MGGKRIRRNK RIVEIIGIDP RTNELITNEV FKWRSATDEI TYSGKSYILE EIMEARGWNE NQMREELKRR QEVLEWMRIK KIRNYKEVAK LLISYYREPD AIIERVRKDL YE
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