Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1474 |
Symbol | |
ID | 5409856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1514384 |
End bp | 1515139 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640868709 |
Product | nitroreductase |
Protein accession | YP_001404635 |
Protein GI | 154151017 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.027208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG TTGGCAAGGA TTTCATGTGG GGGACGCGGT ATCCGGATTT TTCCACAGTG GATCTCGTTC TCCGCGTCCC GGAGCCGGCC CTTGAGATCC CACCCCGGGA AGGACAAGAG ATTATAAAAC TTCCGGCCCC AAAAAAAGTC AAAGTGCCGA ACCGTTCCGT GCGATCTGCA ATCGAAAGCT GGGAGCCACC GGGATTTTTC GCCCGGTCTG ACCTGACACT TCCGGATCTT TCCTATCTTC TCTGGTGCAC CCAGGGTTTG CGAAAGATTG TAGCAGAGAC GGTCCAGATA AGGAACAGCC CTTCCAGCGG TTCGCGTTAC CCGCTTGAAA CCTACTTTGT AGCAAGCGAG GTCGAAGGAC TCGAGATGGG ACTGTACCGC TACCTTCCCT CATCCCACAG CATTGTTGCC GAACGTATCG ATTCCGGCCT CACGCTTGAG ATGAGCACGG CAAGCATGAA TTTCCGGATG GTGACAAGGG CAGCAGTTAC CTTCCTCTGG GTGGCAGTTC CCTACCGGAC GGTCTGGGCC CTTGGCAACC GCGGCTACAG AAGCGCTCTC ATCGAGGCCG GCCATACCTG CCAGAACTTG ATCCTTGCCG CTTCGTCCCT GGAGTACGGG GTCTGTCCTA TCGATCTCTT CCATGACGAG ATGATGGCAA AACTCGCTAA CCTCGATACT GAAACCCAGT GGCCGATCTA CCTTGCAGCA GTGGGAAAGA CTCAGGAGAA TGTCACGCTT GGCTAG
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Protein sequence | MSNVGKDFMW GTRYPDFSTV DLVLRVPEPA LEIPPREGQE IIKLPAPKKV KVPNRSVRSA IESWEPPGFF ARSDLTLPDL SYLLWCTQGL RKIVAETVQI RNSPSSGSRY PLETYFVASE VEGLEMGLYR YLPSSHSIVA ERIDSGLTLE MSTASMNFRM VTRAAVTFLW VAVPYRTVWA LGNRGYRSAL IEAGHTCQNL ILAASSLEYG VCPIDLFHDE MMAKLANLDT ETQWPIYLAA VGKTQENVTL G
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