| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1456 |
|---|
| Symbol | |
|---|
| ID | 5411401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1493738 |
|---|
| End bp | 1495399 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868691 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_001404617 |
|---|
| Protein GI | 154150999 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.240113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAA AAAAGAAGAT CGGCGCAACC GGGCGAATCG TGGCATTCAT TGACATTGGA
ACAAACTCCG TACGGATGCT TGTGGTCCGG TTCAACCCCA ACCATTCCTA CAGTGTTCTT
TCCCGGCAGA AGCAGCAGGC TCGCCTGGGG GAGGGAGAGT TTGACGATGA CGTGATCACC
CCCGAGGCCA TAGACCGGGC CTGCATGGTC TGCCGCAAGT TCGTGGAGCT CGCAAAAACA
TTTGGGGCCG AGGAGTTCGT AGCCGTGGCA ACGTCAGCGG CACGGGAGGC TACCAACCAG
AACATTCTTC TCGAACGGTT CCGAGAGGAG GTGCAGATCG ATGTCCGGGT GATCTCCGGC
CTTGAGGAGG CACGGCTTAT CTACCTTGGC GTTGCAAGCG GGATGCACCT GGGTGAGAAG
CAGGCATTTT TTATCGATAT CGGGGGCGGA AGTACCGAGA TCTCGCTCGG CGGCCAACAG
CAGTTCACCC TTTTAGAAAG TTTCAGGCTC GGGGCGATCC GCCTCACCGG TATGTTCCTT
GCAGATAACC CCCCCGGGCC CGTGCGCCCG GACCAGTACC GGGTCATCCA GCAGTACGTG
AGAAATGCGA TTATCCACAC GGTCCAGAAG ATCAAAAACC AGAAGATCGA TCTGGCCGTG
GGAAGCTCGG GGAGCATCAT GAACCTTGCC GATATTGCGG CAAAGGCGCT TCATCCCGAG
GGCAGCCTTC CGGCAGGCGT TCTCACCTGC CGGGATCTTA AGAAGATAGT AGAGATCCTC
TGCTCCCTTC CCCTTGAAGA ACGCCGGAAG GTGCCCGGGA TCAATCCCGA AAGGGCAGAT
ATCATCATTG CCGGGGCGGT GATTCTTGAG ACATTTATGA AAGAACTTGC CCTGGATTCA
ATCACCACCA CCGGCCGCGG CCTCCAGGAC GGCCTTTTGA TGGACTATCT CTCGCGCATG
GAAGACTTCC CGCTTTTTGG TACGCTCTCC CCCCGGGAAC GAAGCGTGCT CCAGCTGGGC
CGGTCCTGCG GGATAAACGA GGCCCATGCA CGGAACGTGA CAAGGCTGGC GCTTGAGATC
TTTGATTCGG CAAAAGACGT AAAACTTCAC GAGTACGGAG ACAATGAACG TGAACTTCTG
GAATACGCGG CTTTCCTTCA TGACATCGGA TCGTTTATCT CGTTTACCAA CCATCATGCC
CATTCCTATT ATATCATAAA GAATTCCGAG CTGCTCGGCT TTGACCAAAA AGAGATTGAC
ATGATGGCAA ACATTGCCCG GTTCCACCGC AAAAAGAAAC CTCGCAAAAA AAGGCTTGAT
CTCCCGGATT TTGCCGACCA CGAGCAGGGG ACAGTTCTTG TCCTTGCCAT GTTTGTCCGG
CTGGCCGAGA GCCTGGATAG AAGTCATGCG GGGCTCGTGC AGCACGCTGA ATTTGTCCGT
GCAGAAAAAA ACGAGATTGT ACTGGATATT ATCGCAGAAA CGGACTGCCA GCTTGAGATC
TGGGGTGCAG AAGCGGAGCA GCGGGCGTTT GAGAAAGTCT TTGGCCGGCA CCTGAAAATT
GAAGTAATCG CACCAAGCTC CGTGAACAGG GAGGATACTA ATGATGAAGA TACCCTGCCT
GTTCCTCTTG CGGCCGCAAA AAAGAACGGT CCAGCCCGGT AA
|
|---|
| Protein sequence | MKGKKKIGAT GRIVAFIDIG TNSVRMLVVR FNPNHSYSVL SRQKQQARLG EGEFDDDVIT
PEAIDRACMV CRKFVELAKT FGAEEFVAVA TSAAREATNQ NILLERFREE VQIDVRVISG
LEEARLIYLG VASGMHLGEK QAFFIDIGGG STEISLGGQQ QFTLLESFRL GAIRLTGMFL
ADNPPGPVRP DQYRVIQQYV RNAIIHTVQK IKNQKIDLAV GSSGSIMNLA DIAAKALHPE
GSLPAGVLTC RDLKKIVEIL CSLPLEERRK VPGINPERAD IIIAGAVILE TFMKELALDS
ITTTGRGLQD GLLMDYLSRM EDFPLFGTLS PRERSVLQLG RSCGINEAHA RNVTRLALEI
FDSAKDVKLH EYGDNERELL EYAAFLHDIG SFISFTNHHA HSYYIIKNSE LLGFDQKEID
MMANIARFHR KKKPRKKRLD LPDFADHEQG TVLVLAMFVR LAESLDRSHA GLVQHAEFVR
AEKNEIVLDI IAETDCQLEI WGAEAEQRAF EKVFGRHLKI EVIAPSSVNR EDTNDEDTLP
VPLAAAKKNG PAR
|
|---|
| |