Gene Mboo_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1449 
Symbol 
ID5411394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1485657 
End bp1486217 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID640868684 
ProductFe-S cluster domain-containing protein 
Protein accessionYP_001404610 
Protein GI154150992 
COG category[S] Function unknown 
COG ID[COG4739] Uncharacterized protein containing a ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0158204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.046981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTG AGAAAGATGC AGTGGCCACT GTTGCCGGAC TCATGGCCCT TGCAGCCCGC 
ACGGCGCCCA AAGGAAAAGG GCAGGACGAG ATCCTCATCA CGGTACTCAC TGATGTCCAG
AAAAAGAAAG TCGCAACGGC GATGCAGGAG TACGGCACGA AAAATGGCGT GGGTTTCTTC
CTGCGCGACG CCGGCAATGT AGCCGCAAGC GATGCCTGCA TCGTTATTGG TGCCCGGGGA
AAGGCATACG TCGGGATTAA CTGCGGGGCC TGCGGGTATC CCACGTGTGC GGCTTTTGCC
AAGGCAACAG GAAAGGCAAA GACGCAGAAT ACACCTTTTG CCGGCCCGAA CTGTGCGGTG
AGGATGACGG ATCTCGGGAT CGCGGTAGGT TCCGCAGCAA AGACTGCCCA GATCCACAAC
GTGGACAACC GGATTATGTA CTCGGCCGGG TCAATAGCGA TGGCCCTTGG GTTCCTTGGC
AGGGATTGTA CGGCAGCCTA CGCCATCCCG CTCTCGGTAT CTGGAAAAAG TATCTACTTT
GACCGGCCAA CCTCAAAATA A
 
Protein sequence
MTAEKDAVAT VAGLMALAAR TAPKGKGQDE ILITVLTDVQ KKKVATAMQE YGTKNGVGFF 
LRDAGNVAAS DACIVIGARG KAYVGINCGA CGYPTCAAFA KATGKAKTQN TPFAGPNCAV
RMTDLGIAVG SAAKTAQIHN VDNRIMYSAG SIAMALGFLG RDCTAAYAIP LSVSGKSIYF
DRPTSK