| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1421 |
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| Symbol | |
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| ID | 5412023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1450256 |
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| End bp | 1451299 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640868655 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001404582 |
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| Protein GI | 154150964 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0222648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATCT ATATTGACGG GAAATACCTC CCCGAAGGCC TTGCCAAGGT CTCGGTCTTT
GACCACGGCC TGCTCTACGG GGACGGGGTT TTCGAGGGGA TCCGTGCGTA CAACGGCCGG
GTCTTCCGGC TCAAGGAGCA CCTGGACCGG CTCTATGATT CGGCAAAGAC GCTCGATATC
ACCCCGCCGA TCACAAAAGA TGAGATGGCC GAAGCGATCT GCGAGACGCT GCGCAGGAAC
AAGCTTAAGG ACGCCTACAT CCGCCCGATC ATCACCCGGG GCGTGGGCGA CCTTGGCCTT
GACCCCCGCA AGTGCAGGAG AGCGTCCGCT ATCGTTATCG CGGTGACCTG GGGCGCAATG
TACGGCGACC TGTACGAGAA GGGGCTCAAA GCGGTCACGG TCTCGGTCCG GCGCAACCCG
GCAGAATGCC TGCCGCCGAA CGTGAAAAGC CTCAACTATC TCAACAACAT CCTTGCAAAG
ATCGAGGCGA ACTACAAGGG CGGAGACGAG GCGATCTTCT TTGACACGAA CGGCTATGTC
TCTGAAGGCT CGGGCGACAA CCTCTACGTG GTCAAGAACG GCGAGATCTT AACGCCCCAC
ACCCTCAACA ATCTCCGGGG CGTGACCCGG ATGGTGGTGC TTGAGATCGC GGCGTCCCTT
GGCATCACGG TCAAGGAGCA GAACCTCGGA TACTTCGACC TTTATACCGC AGACGAACTG
ATCTGCACGG GGACCGCGGC GGAAGTCGCC CCGATCACCT GGGTGGACGG CAGGGTCATT
GGCTCGGGTA AGCCCGGGCC GGTCACCCGC CAGCTGATGG CAGCCTTTAC GGCGGTTACG
AAGACGGAAG GCCACGCGAT CTATACCAAA GCCCCCGCAA AGGGAAAGGT GGCAGCGGCT
GCAAAATCCG TAAAGAAAAA CAAGACCGTT GCAGCGGCAA AGGCAAAGCC CGGGGCAAAG
AAGACAGCCG CCGCAGCCAC AAAAAAGCCG GTTGTCCGCA AGGCCACGGC ACCGGTAAAG
AAGACCGCAG CCCGGAAGAA ATAA
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| Protein sequence | MIIYIDGKYL PEGLAKVSVF DHGLLYGDGV FEGIRAYNGR VFRLKEHLDR LYDSAKTLDI
TPPITKDEMA EAICETLRRN KLKDAYIRPI ITRGVGDLGL DPRKCRRASA IVIAVTWGAM
YGDLYEKGLK AVTVSVRRNP AECLPPNVKS LNYLNNILAK IEANYKGGDE AIFFDTNGYV
SEGSGDNLYV VKNGEILTPH TLNNLRGVTR MVVLEIAASL GITVKEQNLG YFDLYTADEL
ICTGTAAEVA PITWVDGRVI GSGKPGPVTR QLMAAFTAVT KTEGHAIYTK APAKGKVAAA
AKSVKKNKTV AAAKAKPGAK KTAAAATKKP VVRKATAPVK KTAARKK
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