Gene Mboo_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1414 
Symbol 
ID5412016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1443307 
End bp1443864 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content56% 
IMG OID640868648 
Producthypothetical protein 
Protein accessionYP_001404575 
Protein GI154150957 
COG category[S] Function unknown 
COG ID[COG2457] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.378071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.11817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCT TGAAATCCGG CATCAATGAA GTGATCGCGA CCACCGCATT CAATGCGGCA 
CCTATCGGGA TCCATGTCCG TGACGGGAGC ACGACCATGC TCCTCTTCTC CGGCACCCAC
ACTGTAGAGA ACGTTGTGCG GGACGGGTGG GTGGTGGCAA ACCTCATCCA TGATCCGCTG
CTGTACGTAA AGACTGCGTT TGATGATCTC CCCCGGGATG CATTTGTGGA AGAGCCGGTG
GCAGGAAAAC CGATGTACCG GCTTGCAGAT GCCGAGGCAT GGGTGGCGTT TACTGCACAT
GTGGAAAAGA ATACCTCCGG GACCATCAGG GTCGGGCTCA CCCGGGAAAA AGAGATCATC
GAGAGCGTTG CGGTCCACCC GGTAAACCGG GGCTTCTCTA ACCTTATCGA TGCGACCGTG
CATGCGACCC GGTACCGGGA CAACCGGGAC CCGGAGTTAA AAAAGCTGAT CGATTATCAC
ATCAGCATCG TGCGCAAATG CGGCGGGAAA AAAGAGATTG AGGCGCTCGA CCTGCTGATG
CAGTATATCG GAGAATAG
 
Protein sequence
MGLLKSGINE VIATTAFNAA PIGIHVRDGS TTMLLFSGTH TVENVVRDGW VVANLIHDPL 
LYVKTAFDDL PRDAFVEEPV AGKPMYRLAD AEAWVAFTAH VEKNTSGTIR VGLTREKEII
ESVAVHPVNR GFSNLIDATV HATRYRDNRD PELKKLIDYH ISIVRKCGGK KEIEALDLLM
QYIGE