| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1404 |
|---|
| Symbol | |
|---|
| ID | 5410806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1434649 |
|---|
| End bp | 1435815 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640868637 |
|---|
| Product | cell division protein FtsZ |
|---|
| Protein accession | YP_001404565 |
|---|
| Protein GI | 154150947 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0206] Cell division GTPase |
|---|
| TIGRFAM ID | [TIGR00065] cell division protein FtsZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000684878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.237332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGCA TAATCAACGA TGCACTCAAA AATTCCGAAC TTGAAATGGA AGTAAAAAAG
TCCGGATCCA ATGCACCGGA TGAAGATTTC CTCGGGCAGC CGAGAATTGT TATTATCGGC
TGCGGAGGCG GTGGCAATAA CACCGTCAAC CGTATTCACC ACATGGGTGT CTCGGGCGCG
GAAACCATTG CGATCAACAC GGATAAGCAG CACCTGGATA TGATCCAGGC TGACAAGCGT
GTCCTTATCG GGAAGTCCCT GACCCGTGGT CTTGGTGCCG GTGGTTACCC CGATGTCGGT
AAGCGCGCAG CCGAGATGGC CCGCCCGACA CTCGAGGCAC TGCTTGAATC GGCGGATCTC
GTGTTCATTA CCGCTGGTAT GGGAGGCGGT ACCGGTACCG GTTCAGCCCC GGTTGTTGCT
CAGGTAGCAA AGGAACAGGG CGCAATCGTG GTCGGGATGG TCAGCTACCC GTTCCAGGTT
GAGAAGGCCC GGTTGATCCG TGCAGAAGAA GGACTTGAGG CACTTGCCGC ATCAGCAGAC
TCAGTCATTG TTCTCGATAA CAACCGGCTC AAGAACTTTG TCCCGAATCT CCCGCTGGGC
CAGGCATTCT CCGTCATGGA CCAGCTTATC GGTGAGACCG TTAAGGGTAT TTCCGAGACC
ATCACCGAGC CCTCCCTCAT CAACATCGAT TACGCTGATG TCCGGGCCAT CATGTCCAAG
GGCGGTGTTG CCTCAATGCT TGTTGGAGAG AGCAAGCAGC AGAACAAGGC AGAGAGCGTT
GTCCGCGAGT GCCTGAGCAA CCCGATGCTC GATATCGACT ACCGCGGTGC AACCGGCAGC
CTGATCCATA TTACCGGTGG AACAGACCTT ACCCTGCAGG ATGCAGAAGA GGTCGCAACC
TCGCTCACGT ACGAACTTGA CCCGCACGCA GATGTCATCT GGGGTGCCCG TGTCCGTCCG
GACATGGAAG GCAAGATCCG TGTCCTTGCG ATCATGACCG GTGTCAAGAG CGCACAGATC
CTCGGGACCC GCCAGTCTTA CAAGACCATG GTCCAGGAGA TCGATGCAAA GAGATCCAGC
CCCAAGCAGG TCGAGATGCC CCAGGCAAGA AAGGTAGCCC CCCGGGACCA GACCAGCGGC
GGCGGCGTCC TTGAATGGGT TGGATGA
|
|---|
| Protein sequence | MQSIINDALK NSELEMEVKK SGSNAPDEDF LGQPRIVIIG CGGGGNNTVN RIHHMGVSGA
ETIAINTDKQ HLDMIQADKR VLIGKSLTRG LGAGGYPDVG KRAAEMARPT LEALLESADL
VFITAGMGGG TGTGSAPVVA QVAKEQGAIV VGMVSYPFQV EKARLIRAEE GLEALAASAD
SVIVLDNNRL KNFVPNLPLG QAFSVMDQLI GETVKGISET ITEPSLINID YADVRAIMSK
GGVASMLVGE SKQQNKAESV VRECLSNPML DIDYRGATGS LIHITGGTDL TLQDAEEVAT
SLTYELDPHA DVIWGARVRP DMEGKIRVLA IMTGVKSAQI LGTRQSYKTM VQEIDAKRSS
PKQVEMPQAR KVAPRDQTSG GGVLEWVG
|
|---|
| |