Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1393 |
Symbol | |
ID | 5410955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1425303 |
End bp | 1426391 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640868626 |
Product | DNA primase large subunit |
Protein accession | YP_001404554 |
Protein GI | 154150936 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.402871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.321171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATG TGCCCTCAGG CAAGGAACTA TCCCATTTTC CGTTTTTGAA AAAAGCCCAG GATCCTATCC GGTCCCGGTT TGCTTCGCTT GGAACAATAC TTTCTACTCC CAAAGGAGAG GAGCTCGTCT CATTTGCGGT CGCCCGGATC CGGGACGCAC TTTCCCAGAA AAAAACCCGG GCCCCGGAGG TGCGCGATTC TCCTGAGGAC GAGATCGCCG CATATGCGCT GGCCCGCATT GTCGTTTCCT GTGTGAATGA CAAACAGCTT ATAGACCGGC TCACCCGGTA TGAGGCAGAG AGGGCGTATT ATTTCCTCGT TAACGAAGAA GAGTGGAACA GCCGGTACAC TCAGGGCGAG GGAGAGTATT CCCGCCTCTG GGAAGCAATC GTAGATGAAC TGGGCATCAG AATAGAGAAC AACCGGATGC CGGTACCCGA TTACGTGGAA CTTGTGGCTC CCCTGCACGA GGACCGTTAC CGGTTGATTA ACCGGCGCGT GGAGCAGGGA TTTGTCACGA TCAACAGGGA CGAACGCTAT GATCTGCTGC GGGAGCGGGT CCGTGTACTC CTGCGCCGCG ATCTCCCCCA CCGGGTGCCA AAGGAGGTTT GCGAGCTGCT TGCTCCAAAA GCTGCGGAGA TCAAGAAAGT ATACCAGGAG CAGATGCTCC GGCAGTTTGG CAAAGTGGAA GAAAGTGCCT TTCCCCCGTG CATGCAGGCA TTAATTTCTG CTCTTGCAGC GGGCACTAAC CTCACGCATG CAGGCCGGTT CTCGCTTACT GCATTCCTCC ATAACATAGG TATGGACCTC ACCGGGATTG CAGAACTGTA CGCACGCTCC CCGGACTTCG ATATTGAGAA GACCATGTAC CAGGTTGAGC ATATCACCGG TCGCGGGGGA ACAGGGACTG AGTATACGAC CCCGGCCTGC GCAGCTATGC AGACCACAGG CCTCTGCGTG CACCGGGATG CAATCTGCGA GAAGATCAGC CATCCCCTGA GTTATTACAA AGTAAAAAAG TCCCGACCTC TCAAACCTGC CCCTCAGAAC AGAGAGACTA AAAATGCCGG TGACCCGGAG AACACATAA
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Protein sequence | MEYVPSGKEL SHFPFLKKAQ DPIRSRFASL GTILSTPKGE ELVSFAVARI RDALSQKKTR APEVRDSPED EIAAYALARI VVSCVNDKQL IDRLTRYEAE RAYYFLVNEE EWNSRYTQGE GEYSRLWEAI VDELGIRIEN NRMPVPDYVE LVAPLHEDRY RLINRRVEQG FVTINRDERY DLLRERVRVL LRRDLPHRVP KEVCELLAPK AAEIKKVYQE QMLRQFGKVE ESAFPPCMQA LISALAAGTN LTHAGRFSLT AFLHNIGMDL TGIAELYARS PDFDIEKTMY QVEHITGRGG TGTEYTTPAC AAMQTTGLCV HRDAICEKIS HPLSYYKVKK SRPLKPAPQN RETKNAGDPE NT
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