| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1392 |
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| Symbol | |
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| ID | 5410954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1424559 |
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| End bp | 1425302 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640868625 |
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| Product | DNA polymerase sliding clamp |
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| Protein accession | YP_001404553 |
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| Protein GI | 154150935 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.529509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.388206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAG CAACCATTGA CGCAGAGATA TTCCGGGAGG CCATTGAAGC GATCTCGGCA
CTCGTTCCCG AGTGCCGTCT GCATACCGCG GAAGATGGGA TTACCACCCG GGCTGTAGAC
ACCGCCAATG TCGCCATGAT TGCGTTTACG CTGAAAAAAG AGGCGTTTGA CACCTTCAAG
GCAACCAAGA GCGAGATCGG TGTCGATATC TCCAAGATGA AGAACATCTT CAATATGGGC
GGGAAGGGCG ATCTCATCAG TCTCGAACTT GCGGACAACG CCCAGAAAAT GGCGGTCAGC
GTCCACGGTT ACCATTACTC GATCACCCTC CTTGATACCA ATACTATCAG GAAGGATCCC
AATTCCCCGA CAATCAATCT GCCGGGGAAA GTTGTAATCT CCGGTGAAGA CCTTAATAAT
GCAATCAAGG CTGCTGCAGT CATCTCCGAC AAGATTGCCA TGGGTATCAA TCCCAAGGAC
CAGACATTCT ACATGGTTGC CGAAGGCGAT ACCGATCACA TCCAGCGCGA GTTTGGCAAA
GACGAACTCA AGTCGCTCTC CCCGGTTGAG GCGCGTTCCC TCTTCTCCCT TGACTACCTC
AGGGACATGG GCAAGGTAAT GTCAAAGGCG ACGGAAGTTG AGGTCTGCCT GGGCATTGAC
CACCCGGTTC GGTTCTCCTT TGATATCGCG GGCGGCAACG GGCACGTGGA GTACCTGCTT
GCACCTCGTA TTGAGGCTGA CTGA
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| Protein sequence | MLKATIDAEI FREAIEAISA LVPECRLHTA EDGITTRAVD TANVAMIAFT LKKEAFDTFK
ATKSEIGVDI SKMKNIFNMG GKGDLISLEL ADNAQKMAVS VHGYHYSITL LDTNTIRKDP
NSPTINLPGK VVISGEDLNN AIKAAAVISD KIAMGINPKD QTFYMVAEGD TDHIQREFGK
DELKSLSPVE ARSLFSLDYL RDMGKVMSKA TEVEVCLGID HPVRFSFDIA GGNGHVEYLL
APRIEAD
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