| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1387 |
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| Symbol | |
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| ID | 5412037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1420151 |
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| End bp | 1421152 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868620 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001404548 |
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| Protein GI | 154150930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.316988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.93517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA GCACAAAAGC TGGTATGCTG GTCCTTGTTC TCCTTATTCT CATTCCCGCG
GTGGCAGCTG AGGATGCTAC GGACTGGTAC ACCAAAGCCC AGAACGCTGC TTCAGCAGGC
GACTATACCG ATGCAGTGAT CTATTACACC AATGCAATCA GTCTCAATCC TACCTATGAT
GCCGCATACG CCGGGGAGGC GGCGGCACTT AATTCACTCG GGCAGTATTC CGCGGCACTT
ACCGCAGCAA ACCAGGCCCT TGCAATCCGT TCAAGTCCCA CAGCGCTTGG AGCGCAGGCG
GATGCCCTTT TTTACCTGGG CAGGTACAAT GACGCGATCG GGGCTTATAC CAATTATACT
GCAGTCGTAA CCAATCAACA ATCGGCATAC TGCAATCTTG CATATTCCTA TGTTCAGGTC
AACTATACAA CACAGGCACT TGCCACGTAT TCCCAATGTA CAAATCTTAA CCCAAATGAT
CCATTGGTAT GGAACCAGAT TGGCCTTGTG GATATGTCCT TGGGCAAGTA TACTGATGCC
CTGAATGCAT TTAACAAGGC AACTGCTCTT ACCGTCAATA ATGCTGAGAT CTGGAACAAC
AAAGGAGAGG CACTTGTTGC ACTGGGCCGG TATCAGGATG CAGTTCCCTG CTTTAACACC
GCGCTCACGT TGAATCCGAC CTACACTGCA GCACAGGAAA ACCTGAATGC GGCCATGGGC
AAGGGCCAGG TCTATACGTA TACAATGACA CCCACCCCGA CAGAGTCCCG CTGGTACCTG
GGAGGGATTA CCCCAACAAG CGCAACCCCG ACTGAAGTTG CAGTATCCCT TGAAAATATT
ACCCAGGTTG TCCAGACAGC AACGCCGGTT ACTACAATCC AGGCAACAAC ACCTGTCCCG
ACACGGACCA CGTATACGCC GCTCTCACCA GTTCCGGTGC TTGCGGGCCT TGGTTTTGCA
GTATTCCTTC TGGTCCGGAT CAGGAGAGGT AAGAACCGGT GA
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| Protein sequence | MQMSTKAGML VLVLLILIPA VAAEDATDWY TKAQNAASAG DYTDAVIYYT NAISLNPTYD
AAYAGEAAAL NSLGQYSAAL TAANQALAIR SSPTALGAQA DALFYLGRYN DAIGAYTNYT
AVVTNQQSAY CNLAYSYVQV NYTTQALATY SQCTNLNPND PLVWNQIGLV DMSLGKYTDA
LNAFNKATAL TVNNAEIWNN KGEALVALGR YQDAVPCFNT ALTLNPTYTA AQENLNAAMG
KGQVYTYTMT PTPTESRWYL GGITPTSATP TEVAVSLENI TQVVQTATPV TTIQATTPVP
TRTTYTPLSP VPVLAGLGFA VFLLVRIRRG KNR
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