Gene Mboo_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1382 
Symbol 
ID5412032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1415019 
End bp1415447 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content49% 
IMG OID640868615 
ProductUspA domain-containing protein 
Protein accessionYP_001404543 
Protein GI154150925 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.378027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTA ACATACTTGT TGCCATCGAT GGTTCAAAGG CAAGCGATCA GGCTATCGAA 
CGGGCTGTCG ACGAAGCAAA ATTATGGAAC GCACGGCTTC ATGCAGTATA CGTGGTAGAA
ACGGGCCTTT TTACATCACT CCCCTCAGAC AATACCGTAG AACTCATGTA CCGTGCGCTT
GAAACCGAGG GGAATGCAGT CCTTGAAAAA GCAAAAAAAA TCGCAGCAAA AAATGGTGTA
ACTCTTACTC CGCACTTAAA GCAGGGACAC GCCGGGAGCG AGATTCTGGC TCTGGCCGCA
AAAGAGAAGG CCGACCTTAT CGTTTCTGGT TCCCACGGTA AGAGCAGGAC CGACAGCATT
CTCTTAGGAA GCGTCAGCAC CTATATTACT ACACACAGCC CGGTCACGAC CATGGTGGTG
AGATCATAA
 
Protein sequence
MFTNILVAID GSKASDQAIE RAVDEAKLWN ARLHAVYVVE TGLFTSLPSD NTVELMYRAL 
ETEGNAVLEK AKKIAAKNGV TLTPHLKQGH AGSEILALAA KEKADLIVSG SHGKSRTDSI
LLGSVSTYIT THSPVTTMVV RS