Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1382 |
Symbol | |
ID | 5412032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1415019 |
End bp | 1415447 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640868615 |
Product | UspA domain-containing protein |
Protein accession | YP_001404543 |
Protein GI | 154150925 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.378027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTA ACATACTTGT TGCCATCGAT GGTTCAAAGG CAAGCGATCA GGCTATCGAA CGGGCTGTCG ACGAAGCAAA ATTATGGAAC GCACGGCTTC ATGCAGTATA CGTGGTAGAA ACGGGCCTTT TTACATCACT CCCCTCAGAC AATACCGTAG AACTCATGTA CCGTGCGCTT GAAACCGAGG GGAATGCAGT CCTTGAAAAA GCAAAAAAAA TCGCAGCAAA AAATGGTGTA ACTCTTACTC CGCACTTAAA GCAGGGACAC GCCGGGAGCG AGATTCTGGC TCTGGCCGCA AAAGAGAAGG CCGACCTTAT CGTTTCTGGT TCCCACGGTA AGAGCAGGAC CGACAGCATT CTCTTAGGAA GCGTCAGCAC CTATATTACT ACACACAGCC CGGTCACGAC CATGGTGGTG AGATCATAA
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Protein sequence | MFTNILVAID GSKASDQAIE RAVDEAKLWN ARLHAVYVVE TGLFTSLPSD NTVELMYRAL ETEGNAVLEK AKKIAAKNGV TLTPHLKQGH AGSEILALAA KEKADLIVSG SHGKSRTDSI LLGSVSTYIT THSPVTTMVV RS
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