| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1376 |
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| Symbol | |
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| ID | 5412133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1409422 |
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| End bp | 1410627 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868609 |
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| Product | TraB family protein |
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| Protein accession | YP_001404537 |
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| Protein GI | 154150919 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.247972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC TTCGGATTGT CGGGACTGCA CACGTTTCCC AGAAAAGTGT TGATGAGGTG
AAAGCCGCAA TCGAGGAGTT CCGGCCGGAC ATTGTTGCAA TAGAACTGGA TCCTGCCCGG
TTTGCGGCCC TCAAGAAACA GGCAAAGGAC CCGACCGTGG AGGATGTCCT TGAAGTCAAG
AACTTCAACT CGCTTCTTGT CCAGTGGCTC CTCTCCTACC TCCAGCGCAA GATCGGCGTC
GATGTTGGTG TTGAGCCCGG GGCCGAGATG AAGGCTGCCA TTACTGAAGC AGAAAGCCGC
AATATCCCGG TTGCCCTCGT GGACCGCGAC ATCCGCCTTA CTCTGCTCCG GTTCTGGAAA
TCCATGGGGG TAATCGAGAA GATCAAGATG TTTTTTGCAT TAATCTTCTC GATTGCCGAA
GTGGACAAGG GAGAACAGAT CGATATCGAA TCTCTCAAGG ACCAGGATAT CATCGATGCT
GTCATGGAGG AGTTTCACCG GTTTTCGCCC AACGGGGCCC ATGCGCTGAT TGACGAGCGG
GATGCGTTCA TCGCCCACCA GCTGGTCATT CTCAAGGCGC AGAGACCGGA TGCCCGCATC
CTTGCCATAG TCGGTGCCGG CCACCGCCAG GGCATTACGA ATTATGTCGA GAAACCGCAG
ACCCTGCCGC CGTTTGATTC ACTCATTAAA GAGCCAAAAT CCTTTCCCTG GGCAAAAATT
TTCGGTTTTG CAGTCACCGG GCTCTTTGCA TTCCTGCTTG CCGCGATTGC ATTTTCTGGC
GTAGGCTGGA CAGTACTCCT GTACGCACTC CTCTTCTGGG TAATCATTCA CGGGGTGCTT
GCCGCGGTAT TTACCCTCAT TGCCGGCGGC CATCCCTATT CTGCCCTAAC CTGTTTTGCC
GTGGCGTGGA TGACATCACT TAACCCGCTG CTCCATGCCG GGTGGTTTGC CGCATACGTT
GAGGCAAAGG TCAGGAAGCC GCCGGTTTCG GATTTCCGGA AGATCTATGA GACAGAGTCA
TTGCGGGAGA TGGCACGCAT ACCGCTCTTT AAAGTCGTAC TCGTGGCAGC GCTGGCAAAC
CTGGGAAGCC TGATAGGTAC CGTGCTGTAT TTTTTCCTTG TCTTCCCGCT GCTTCACATT
GACCCGGGAA CGGTGATCTC CACCGGGGTT CACAACATGT ATACGTGGGT CGCCGGGCTC
ATTTAA
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| Protein sequence | MAELRIVGTA HVSQKSVDEV KAAIEEFRPD IVAIELDPAR FAALKKQAKD PTVEDVLEVK
NFNSLLVQWL LSYLQRKIGV DVGVEPGAEM KAAITEAESR NIPVALVDRD IRLTLLRFWK
SMGVIEKIKM FFALIFSIAE VDKGEQIDIE SLKDQDIIDA VMEEFHRFSP NGAHALIDER
DAFIAHQLVI LKAQRPDARI LAIVGAGHRQ GITNYVEKPQ TLPPFDSLIK EPKSFPWAKI
FGFAVTGLFA FLLAAIAFSG VGWTVLLYAL LFWVIIHGVL AAVFTLIAGG HPYSALTCFA
VAWMTSLNPL LHAGWFAAYV EAKVRKPPVS DFRKIYETES LREMARIPLF KVVLVAALAN
LGSLIGTVLY FFLVFPLLHI DPGTVISTGV HNMYTWVAGL I
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