Gene Mboo_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1368 
Symbol 
ID5412125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1398649 
End bp1400496 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content63% 
IMG OID640868601 
Productferredoxin 
Protein accessionYP_001404529 
Protein GI154150911 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.348316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC CCGATGCACC GGTGATCAGG GTAATCTTCC AGCCGATGAA CCGGGTGGTC 
ACGGTTCCGT CCGGTACCTC GCTCCTTTCT GCAATCGTGC TTGCCGGGCT TACTATCGAG
AGTATCTGCG GGGGAAAGGG AACCTGCGGG AAGTGCAGGG TCATCCTGAA TTCCGGCAGC
TGCACGGACG CGCCGGACAC CGTCACCGGC TGTCGCCTCA CCCGGAAGGA ACGGGAAGCC
GGCTACCATC TTGCCTGCCA GGTGACGGTG CTTTCCGATG CGGAATTTAC GATTCCGGTA
GAGAGCCGGA TCGACTCCCC GCAGATCCTG GTAACAAAGC CTGCTGTGGC CGGCACGGTT
GAACCAATGG TCATGCAGTA CCTCGTGGAA CTCTTTCCTA TCGAAGGCCT GCCGGTGGCC
TCGCAGTCCG TCCGGTTTGC CGGCTATTCC GGCCTGCGCC CCCGGATGAC CGACGAGCAG
TACCACGCGC TCCTGGACCC GGATACCCCT CAGACGGCTC TTCTCTCCAC GCTTCATTCG
CCTCCCAAGG TGCTTGCGTT CCTGCCTGCC GAGAATCCGG TCCGGCTGTA CGGCGTGGCT
ATCGACCTTG GGACCACCAC CGTGGTTGGC TGCCTTGCCC GGCTTGACAC CGGCGAGATC
CTTGCCACGG CTTCCACCCT GAACCGCCAG ATCACCTATG GCGAGGAACT CCTCACCCGG
ATCGGGTACG CGGCCTCTCC TGCGGGTCTC GCTACGCTCC AGAAATCAGC AGCCGCTGCC
ATTAACGATG TGATTGCAAC CCTGGCCTTA AATGCCGGTG TCGAACCCAC AGCCATCTTT
GCCCTCACTA TAGCCGGAAA CACGGTGATG AACCACCTGC TCTGCGGCCT TGATCCCCAC
TACCTTGAGC TTGCAGATGC CGAGGTCTCG CGTGTGCCGC TTATCCGGAC TGCACAGGGG
CTTGGTCTTC TTGCCAACCC GGCGGCTGAG GTCTACTGCC TTCCCAATGT CAGCCGGTTC
GTGGGCGGGG ATGCGATAGG TGATATGATC ACGGCCGGGA TGCAGGAATC CGATGACCTC
AGCCTGATGG TGGATCTGGG AACAAACGGA GAGATCGTGC TTGGCGACCG GCACTGGTCT
GCCTCGGTCT CCTGCGCCTC CGGCCCCGCA TTCGAGGGTG CCGGCATCCG GGCCGGGATG
CGGGCGATGA AAGGAGCGAT AGATCATGTG GAGGGAGACC CGACAACCGG GAAGATCCGC
TGGACCACGA TCGGCGCTGC CCCGCCCCGG GGCATCTGCG GCTCGGGGAT CGTGGACCTT
GCTGTTGCCC TGGTAGAGAC CGGTGCCCTG GATTTTGCCG GCAAGTTCGA TTCCACCAGT
CCCCGGGTCC GGGCCGGGCC TGACGGGGCA GAATACCTCC TTGTCCGGGA CGATGAGAGC
GGGACCGGGC GGGAGATCGT GATTACCCAG CAGGACATCG ATTACCTCAT GGACTCCAAG
GCCGCGGCCT GCGGGGCGAT CGCGGTCCTT CTCAAGCGGT ACAAGCATAC GGTGGGCGAT
GTCCGGCACC TGTACCTTGC CGGTGCATTC GGGGCCTACA CCAACATCGA AAAGGCGGTC
CGGTTCGGGA TCCTTCCCTG GTTCCCGGCA GCCACGGTCC ACATGATCGG AAACGGGTCG
CTCTCGGGGG CATATGCCTG CCTTGTGTCG GAGAAGAGCC GGGCCGCGGC CGAGTCCATG
GCCCGGCACA TGGTGTACAT CGATCTTATG ACCGACACGG CGTTTGCCGA GGAGTACGCG
GCTGCACTCT ATATCCCGGG ACGTCCCGAT CTCTTCCCCT CGAAATAA
 
Protein sequence
MEQPDAPVIR VIFQPMNRVV TVPSGTSLLS AIVLAGLTIE SICGGKGTCG KCRVILNSGS 
CTDAPDTVTG CRLTRKEREA GYHLACQVTV LSDAEFTIPV ESRIDSPQIL VTKPAVAGTV
EPMVMQYLVE LFPIEGLPVA SQSVRFAGYS GLRPRMTDEQ YHALLDPDTP QTALLSTLHS
PPKVLAFLPA ENPVRLYGVA IDLGTTTVVG CLARLDTGEI LATASTLNRQ ITYGEELLTR
IGYAASPAGL ATLQKSAAAA INDVIATLAL NAGVEPTAIF ALTIAGNTVM NHLLCGLDPH
YLELADAEVS RVPLIRTAQG LGLLANPAAE VYCLPNVSRF VGGDAIGDMI TAGMQESDDL
SLMVDLGTNG EIVLGDRHWS ASVSCASGPA FEGAGIRAGM RAMKGAIDHV EGDPTTGKIR
WTTIGAAPPR GICGSGIVDL AVALVETGAL DFAGKFDSTS PRVRAGPDGA EYLLVRDDES
GTGREIVITQ QDIDYLMDSK AAACGAIAVL LKRYKHTVGD VRHLYLAGAF GAYTNIEKAV
RFGILPWFPA ATVHMIGNGS LSGAYACLVS EKSRAAAESM ARHMVYIDLM TDTAFAEEYA
AALYIPGRPD LFPSK