Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1368 |
Symbol | |
ID | 5412125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1398649 |
End bp | 1400496 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640868601 |
Product | ferredoxin |
Protein accession | YP_001404529 |
Protein GI | 154150911 |
COG category | [R] General function prediction only |
COG ID | [COG3894] Uncharacterized metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.348316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC CCGATGCACC GGTGATCAGG GTAATCTTCC AGCCGATGAA CCGGGTGGTC ACGGTTCCGT CCGGTACCTC GCTCCTTTCT GCAATCGTGC TTGCCGGGCT TACTATCGAG AGTATCTGCG GGGGAAAGGG AACCTGCGGG AAGTGCAGGG TCATCCTGAA TTCCGGCAGC TGCACGGACG CGCCGGACAC CGTCACCGGC TGTCGCCTCA CCCGGAAGGA ACGGGAAGCC GGCTACCATC TTGCCTGCCA GGTGACGGTG CTTTCCGATG CGGAATTTAC GATTCCGGTA GAGAGCCGGA TCGACTCCCC GCAGATCCTG GTAACAAAGC CTGCTGTGGC CGGCACGGTT GAACCAATGG TCATGCAGTA CCTCGTGGAA CTCTTTCCTA TCGAAGGCCT GCCGGTGGCC TCGCAGTCCG TCCGGTTTGC CGGCTATTCC GGCCTGCGCC CCCGGATGAC CGACGAGCAG TACCACGCGC TCCTGGACCC GGATACCCCT CAGACGGCTC TTCTCTCCAC GCTTCATTCG CCTCCCAAGG TGCTTGCGTT CCTGCCTGCC GAGAATCCGG TCCGGCTGTA CGGCGTGGCT ATCGACCTTG GGACCACCAC CGTGGTTGGC TGCCTTGCCC GGCTTGACAC CGGCGAGATC CTTGCCACGG CTTCCACCCT GAACCGCCAG ATCACCTATG GCGAGGAACT CCTCACCCGG ATCGGGTACG CGGCCTCTCC TGCGGGTCTC GCTACGCTCC AGAAATCAGC AGCCGCTGCC ATTAACGATG TGATTGCAAC CCTGGCCTTA AATGCCGGTG TCGAACCCAC AGCCATCTTT GCCCTCACTA TAGCCGGAAA CACGGTGATG AACCACCTGC TCTGCGGCCT TGATCCCCAC TACCTTGAGC TTGCAGATGC CGAGGTCTCG CGTGTGCCGC TTATCCGGAC TGCACAGGGG CTTGGTCTTC TTGCCAACCC GGCGGCTGAG GTCTACTGCC TTCCCAATGT CAGCCGGTTC GTGGGCGGGG ATGCGATAGG TGATATGATC ACGGCCGGGA TGCAGGAATC CGATGACCTC AGCCTGATGG TGGATCTGGG AACAAACGGA GAGATCGTGC TTGGCGACCG GCACTGGTCT GCCTCGGTCT CCTGCGCCTC CGGCCCCGCA TTCGAGGGTG CCGGCATCCG GGCCGGGATG CGGGCGATGA AAGGAGCGAT AGATCATGTG GAGGGAGACC CGACAACCGG GAAGATCCGC TGGACCACGA TCGGCGCTGC CCCGCCCCGG GGCATCTGCG GCTCGGGGAT CGTGGACCTT GCTGTTGCCC TGGTAGAGAC CGGTGCCCTG GATTTTGCCG GCAAGTTCGA TTCCACCAGT CCCCGGGTCC GGGCCGGGCC TGACGGGGCA GAATACCTCC TTGTCCGGGA CGATGAGAGC GGGACCGGGC GGGAGATCGT GATTACCCAG CAGGACATCG ATTACCTCAT GGACTCCAAG GCCGCGGCCT GCGGGGCGAT CGCGGTCCTT CTCAAGCGGT ACAAGCATAC GGTGGGCGAT GTCCGGCACC TGTACCTTGC CGGTGCATTC GGGGCCTACA CCAACATCGA AAAGGCGGTC CGGTTCGGGA TCCTTCCCTG GTTCCCGGCA GCCACGGTCC ACATGATCGG AAACGGGTCG CTCTCGGGGG CATATGCCTG CCTTGTGTCG GAGAAGAGCC GGGCCGCGGC CGAGTCCATG GCCCGGCACA TGGTGTACAT CGATCTTATG ACCGACACGG CGTTTGCCGA GGAGTACGCG GCTGCACTCT ATATCCCGGG ACGTCCCGAT CTCTTCCCCT CGAAATAA
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Protein sequence | MEQPDAPVIR VIFQPMNRVV TVPSGTSLLS AIVLAGLTIE SICGGKGTCG KCRVILNSGS CTDAPDTVTG CRLTRKEREA GYHLACQVTV LSDAEFTIPV ESRIDSPQIL VTKPAVAGTV EPMVMQYLVE LFPIEGLPVA SQSVRFAGYS GLRPRMTDEQ YHALLDPDTP QTALLSTLHS PPKVLAFLPA ENPVRLYGVA IDLGTTTVVG CLARLDTGEI LATASTLNRQ ITYGEELLTR IGYAASPAGL ATLQKSAAAA INDVIATLAL NAGVEPTAIF ALTIAGNTVM NHLLCGLDPH YLELADAEVS RVPLIRTAQG LGLLANPAAE VYCLPNVSRF VGGDAIGDMI TAGMQESDDL SLMVDLGTNG EIVLGDRHWS ASVSCASGPA FEGAGIRAGM RAMKGAIDHV EGDPTTGKIR WTTIGAAPPR GICGSGIVDL AVALVETGAL DFAGKFDSTS PRVRAGPDGA EYLLVRDDES GTGREIVITQ QDIDYLMDSK AAACGAIAVL LKRYKHTVGD VRHLYLAGAF GAYTNIEKAV RFGILPWFPA ATVHMIGNGS LSGAYACLVS EKSRAAAESM ARHMVYIDLM TDTAFAEEYA AALYIPGRPD LFPSK
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