Gene Mboo_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1348 
Symbol 
ID5410284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand- 
Start bp1374628 
End bp1375236 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content50% 
IMG OID640868580 
Productflagellin 
Protein accessionYP_001404509 
Protein GI154150891 
COG category[N] Cell motility 
COG ID[COG1681] Archaeal flagellins 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.182161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.109167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGT TCAAACATAA AGATGAAGGA TTCACCGGCC TTGAGGCAGC GATTGTGCTG 
ATTGCATTCG TTGTCGTCGC GGCGGTGTTC TCGTATGTAG TACTCGGCGC CGGGTTCTTC 
ACGACGCAGA AGGCACAGCA GACTGTACAC ACCAGTGTCG AGCAGTCCAG TTCGACCTTG 
GAGATAGTAG GAAATGTGTA TGGTACAAAT TCCGCTGCAA CCGGAGCACC AGGAGATACG 
GTTAAGTTTA TCAACTTTAG CATGGCCTTA GCTCCCGGCG GAACTCCCAT TGACTTTTCA 
AAAGTGGTTC TGGTTTATAG TAATGAGACC CAAGTCGTCA CCCTGACAAA CTCAACAAGT 
CTGACTCCGC CCACAGAACC GTCGACTACT GCAGCAAATA CATGGTCGGT TAACAGTGTT 
CAAAATAGCC CGTCGAGTAC CGCATCCCTG TTGCTCCAGC CAAACGAGCA GTTCGGCATT 
AGCTGTTATG TTCCCGGCAT TCCCGCGAAT GATCAGTTTA CCATTGAGGT CAGGCCATCA 
ATTGGAGCTG CCTTCAGTAT AACGCGGACT GTTCCCGCCG CTGTAAATGC AGTGAACATC 
CTCTATTAA
 
Protein sequence
MSSFKHKDEG FTGLEAAIVL IAFVVVAAVF SYVVLGAGFF TTQKAQQTVH TSVEQSSSTL 
EIVGNVYGTN SAATGAPGDT VKFINFSMAL APGGTPIDFS KVVLVYSNET QVVTLTNSTS 
LTPPTEPSTT AANTWSVNSV QNSPSSTASL LLQPNEQFGI SCYVPGIPAN DQFTIEVRPS 
IGAAFSITRT VPAAVNAVNI LY