Gene Mboo_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1324 
Symbol 
ID5411783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1349526 
End bp1350635 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content56% 
IMG OID640868556 
Productradical SAM domain-containing protein 
Protein accessionYP_001404485 
Protein GI154150867 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.527969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAA ACTGGAGGGA GATCCCAGCC GCACGGAATT CCTATGCCGT CCTTTCTGCG 
GCATGCGCGG CAGGAGGCTG GAATCTCCAG CCCGTGGAAA AGCCGGAGGC TGACGTTACC
TGTTATTCGC TTACGTCGAT AAGCGTGCGG AGATACCGCG ACGAGATCGC CGGGGCCGGC
TGCATCACGA TCGCCGGGGG GCCGCATGCG ACAGCCTGCT GGCATGAAGT CGCAGAGTAT
ACCGATTATG TGGTCGTGGG GGAAGGGGAA TATACCCTTC CGGCACTCCT TGCCGATCTT
GAGGCCGGGG GAAGCTGCAG AATTCCCGGA GTAGCAACCC GGGAGGGATA CGAGCCGGTA
AAAAGCAGCG TCCGACTCGA CGCCTACCCG GCTTTTTCCG AGGTAAAAGG CTACGTGGAG
ATCTCACGCG GCTGCCCCTT TGCCTGCGGG TACTGCCAGA CTCCACAGAT CTTCGGACAC
TGCATGCGGC ACCGCTCGAT AGACGAGATC GCGAAATATG CCAACCGGTA CGGGCAGGCA
CGGTTTGTTT CCCCCAATGC CTTTGCCTAT GGATCGGACG GGATCCACCC GCGTTTTGAC
AAAATCGAAC GCCTCTTACA AAAGATCAAA AAAGAGATCT TTTTTGGGAC ATTCCCGAGC
GAGGTCAGGC CGGAATTTGT CTGCGAAAAG TCACTTGCCC TTATCTCCGA ATACTGTACC
AATACAAAAC TTCACTTTGG CGCCCAGTCG GGGAGTGATG CGGTGCTCAA ACGACTCCGC
CGGGGACATA CCGTGGATGA CGCGATTGCG GCAGCAGAAC TCTGCGCCGT TGCCGGGATC
ACCCCGGTGA TTGATTTTAT TGTCGGATTT CCCTTTGAGA CTGACGAAGA CCAGGAGGCT
ACTATTACCG TGATAAAAGA TCTCTCGCGG ATTGGGAAGA TCCATGTCCA CCGGTTCATA
CCGCTCCCCG GAACAGACCT CACCGGAACA TGTGCGCGTC CGCTCCTTCC TGCCACAGAA
AAAATCTGCG GGGATCTCGC CTTCGGCGGT AAACTGACCG GCTCATGGAA CGACCCTGAG
ATAAGGTTTT TTAAAAGCCG TTCTCAATGA
 
Protein sequence
MQVNWREIPA ARNSYAVLSA ACAAGGWNLQ PVEKPEADVT CYSLTSISVR RYRDEIAGAG 
CITIAGGPHA TACWHEVAEY TDYVVVGEGE YTLPALLADL EAGGSCRIPG VATREGYEPV
KSSVRLDAYP AFSEVKGYVE ISRGCPFACG YCQTPQIFGH CMRHRSIDEI AKYANRYGQA
RFVSPNAFAY GSDGIHPRFD KIERLLQKIK KEIFFGTFPS EVRPEFVCEK SLALISEYCT
NTKLHFGAQS GSDAVLKRLR RGHTVDDAIA AAELCAVAGI TPVIDFIVGF PFETDEDQEA
TITVIKDLSR IGKIHVHRFI PLPGTDLTGT CARPLLPATE KICGDLAFGG KLTGSWNDPE
IRFFKSRSQ