Gene Mboo_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1321 
Symbol 
ID5411780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1346710 
End bp1348068 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content59% 
IMG OID640868553 
Productprotein kinase 
Protein accessionYP_001404482 
Protein GI154150864 
COG category[R] General function prediction only 
COG ID[COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.401211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAG TGCCTCTTTC TTCCGGCCAG CGCCTCCGGG CCCGCCAGCT TCAGACCGAC 
CTGCAGGTAA TAAAAAAGAT CGGAGAGGGC ACTCAGGGCG AGGTGTATCT CGTGGACGGC
CCGCAGGGAT ACCAGACTGT GAAATGGTAC CGCCCTGATC AGGCAACCCC GGAGCAGAAG
GATGCCATTG CCTACCTGGT CCGGACCGGC CCACCGTACG GGGCAGCGGG CAGGAGATTT
ATCTGGCCGC TCGACTTGGT TACCGCTGAT GAAACCAGAC AGTTCGGGTA CCTTATGGCC
CGGATAGACA CGGAGCGCTT TGCCGAGCTT GGCGAGATCT GGGCGCATCT CAAGCCGGTC
CCGGGGATTG CGGCGCTCTG CGAGATCTCC TACCAGCTGG CAAACAGTTA CCGGGCGCTC
CACCTTTCAG GCCACTGCTA CCGGGACATC TCGGCCGGGA ACCTGATGTT TGATCCAAAA
ACCGGTGATG TACTTATCTG TGATAACGAT AACGTGGGCA TCAACCGTCA GTCACAAAGC
CAGGTCTGGG GGACACTGGA GTATATGGCT CCCGAACTTA TCCGTGGGGA GTGCGATCCT
TCAACTGAAA CCGATCTCCA TGCTCTTGCG GTCCTGCTCT TCTATCTGTG GGTCTGGCAC
CACCCATTCC ATGGCGAAAT GGAGTACCGG TATCACTGCT GGGATATCCC GGCAAAAAAG
CAGGTGTACG GCATTAACCC GGTATTTGTC TTTGACCCGG AGAATACGAC AAACCGCCTT
CCCTATGATC CGGATTATGC GATTGCCCGC CGCCGCTGGG AACTCTGTCC CCCGGGACTC
AAAGCACTCT TTACCCGGGC TTTTACCGAG GGTCTTTCCA CTCCGGGCCG TCGGGTTACC
GAAGGAGAAT GGCAGGGGCT CTTTTCCTCC CTCAAGGACC GGGTGATGCC CTGCCCCCGC
TGCCGGGCTG AGAACATTGC CGGGGAAAAC GGGGCGGACT TTTCCTGCTG GAACTGCAAA
AGCCCGATTC CTCCGCTGCC GTTTCTCCTG ATCCGCCGCC CTGGAGGGAA TGCCTCTATT
GCACTAGCCC TGGGCACTAC CCTGCACGCT TATCATACCG ACCCGGGAAA CAGCAACGGC
GGAGGTACTA CGGAGATTGG CCGGGTGGTC TCCCATCCGG CAATTCCGGG CGCTGCCGGG
ATCCGGAACC TCTCCGAAAG TACCTGGAGG GTAACGTTTC CTGATGGGAC AATCGCTGCT
GTCCCCCCGG GTAAGGCCGT GCCCCTTCAC CCGAAAACCT CCATTATCAT TGACGGCATA
TCCTGTACCA TCATGCCGCC GGGCCGGGAG ACTTCATGA
 
Protein sequence
MVAVPLSSGQ RLRARQLQTD LQVIKKIGEG TQGEVYLVDG PQGYQTVKWY RPDQATPEQK 
DAIAYLVRTG PPYGAAGRRF IWPLDLVTAD ETRQFGYLMA RIDTERFAEL GEIWAHLKPV
PGIAALCEIS YQLANSYRAL HLSGHCYRDI SAGNLMFDPK TGDVLICDND NVGINRQSQS
QVWGTLEYMA PELIRGECDP STETDLHALA VLLFYLWVWH HPFHGEMEYR YHCWDIPAKK
QVYGINPVFV FDPENTTNRL PYDPDYAIAR RRWELCPPGL KALFTRAFTE GLSTPGRRVT
EGEWQGLFSS LKDRVMPCPR CRAENIAGEN GADFSCWNCK SPIPPLPFLL IRRPGGNASI
ALALGTTLHA YHTDPGNSNG GGTTEIGRVV SHPAIPGAAG IRNLSESTWR VTFPDGTIAA
VPPGKAVPLH PKTSIIIDGI SCTIMPPGRE TS