Gene Mboo_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1312 
Symbol 
ID5410625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1337481 
End bp1338056 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID640868544 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001404473 
Protein GI154150855 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.134499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCC TGACACCAGA TGAAGGCATC CTTGCCATCC GGCTCGCCCG CGGGGCCATT 
GAATACACCA TTGCCAAGAG ACCCAAACCG ATGGTTCACC TGACACCGGT CTTTGCGGAG
AAGCGGGGGG TCTTTGTAAC CCTGACCAGG AACCATCAGC TCCGGGGCTG CATCGGCTTT
CCCTACCCGG TGATGCCACT CGGGGACGCG ATCGAGGACG CCGCGGTTGC TGCAGCCCTC
GAAGACCCCC GGTTTCCCGG TGTGAAAAAA GACGAGCTTT CATCACTTGA TTTCGAGGTG
ACCGTGCTGA CCCCCCCGGT CCCCCTGGAA TGTGCGCCTG AAGATCGCCC GGCCCATATA
GAGATAGGGC GCCACGGCCT GATTGCCCGG GGCTTTGGCA CAAGCGGACT TTTGCTCCCA
CAGGTGGCAA CCGAGTACGG CTGGGATGTA AAAACCTTCC TTGATCATAC TTGCGAGAAG
GCCGGGCTCT CACGGGACTG CTGGACAAAG AAGAATGTGG AGATCCTTAC TTACGAGGGC
CAGATCTTTA CCGGTTCCTT TAAGGAATCA CTTTAA
 
Protein sequence
MQLLTPDEGI LAIRLARGAI EYTIAKRPKP MVHLTPVFAE KRGVFVTLTR NHQLRGCIGF 
PYPVMPLGDA IEDAAVAAAL EDPRFPGVKK DELSSLDFEV TVLTPPVPLE CAPEDRPAHI
EIGRHGLIAR GFGTSGLLLP QVATEYGWDV KTFLDHTCEK AGLSRDCWTK KNVEILTYEG
QIFTGSFKES L