| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1307 |
|---|
| Symbol | |
|---|
| ID | 5411952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1330963 |
|---|
| End bp | 1332393 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640868538 |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Protein accession | YP_001404468 |
|---|
| Protein GI | 154150850 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.424355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0731768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATGC TTATCAACGG GAAAGCGGAC GCAGGTAACG GTTCCGCATG GATTGAGGTA
ATAAACCCGG CAACCGGGGA ACTGGTCGAG CGGGTACCGG CCGGGTCAAA GGATGATGTG
AATGCGGCAG TTGAATCTGC GGATCTCGCA TTTGGGGCAT GGTCGGAAAA AACCATGAGG
GAGCGTGGCC TTCTCCTTGG CCGGGCCGCA GAACTGGTGC GCCGGGACCA CAAACAACTG
GCCGAATTGT TAACCCGGGA ACAGGGAAAA CCGATCCGGG AAGCCATTGA TGAGGTACGG
GGCTGTGCCA ATATCCTTGA GTACTATGCC TCTATTGCAG GCAAGCCGGC CGGCGAAGCG
GTCAGCCTGG GTAAAGCCGG CGACTGCCTG GTGACACGTG TCCCCTTGGG AGTCTGCGGC
GCGATCATCC CATGGAACAT GCCGGTGATC ATCATGGGCT GGAAGGTGGG CCCGGCGCTC
CTTTCCGGAA ATACCCTTGT CCTCAAACCG GCATCCACTG CACCCCTCAC AAATCTGAAG
ATCGCCGGGC TCTTTTCCGA GGCGGGTCTC CCGGCCGGAG TGCTCAACGT GGTGACCGGA
TCAGGAGAGA TCGCAGGAGA GGCGCTCGTG CAGCACAAGA GGGTAAAAAA GATCTCTTTT
ACCGGGAACG GAATCACCGG CCGGAGGATT CGGGAGCTTA CCGGTAACCG GCTTGCAGCG
CTCACGCTGG AGCTGGGCGG CTCAGACCCG ATGATTGTGA TGGCCGATGC AGATGTAAAA
AAAGCGGTCG AAGGGGCGAT CCGGGGCCGG TTCTATAACG CCGGACAGGT CTGCACTGCG
GTAAAACGGC TGTACCTGCA CGAGAAGATT GCCGAAGAGT TCATGCGCGA GCTGACTACA
AAGGTCGAGG GGCTGAAAGT TGGAAACGGG CTTGTACCGG GAACCGATAT GGGCCCGCTC
AACAGCCCTG CCCAGCGCGA CCGGATCGCA ACCGTGGTCC ATGAGATAAC TGCAAACGAT
GAAGGAAAGA TTCTGACCGG CGGCTGTCCG GTACCGGGAA AGGAGTATGA GCGGGGTAAT
TTCTATAAGC CTACACTGGT CGGGGACGTG CCCCCGGATG CGGCACTGCT GAAAAACGAG
ATCTTCGGAC CGGTCTTACC GGTGATGACC TTCCCGGATC TTGCCACCGC GATTGCCGAA
GCAAACCGCT CGCTGTACGG CCTTGGTGCG TCGGTCTGGA CCCGGGACCT TGCCACGGTT
AAAGAGTTTT TTACCCATGT TCACGCCGGG ATCGTCTGGG TGAACCGCCA CCTCACCCTC
CCTCCCGAGG TGCCGTTTGG CGGTACCGAA GAGAGCGGGA TAGGGCGAGA GAACGGCTTC
CATGCCATAG ACAGTTACAC CCAGACAAAG ACGCTCTTTT TAGGCTGGTA A
|
|---|
| Protein sequence | MEMLINGKAD AGNGSAWIEV INPATGELVE RVPAGSKDDV NAAVESADLA FGAWSEKTMR
ERGLLLGRAA ELVRRDHKQL AELLTREQGK PIREAIDEVR GCANILEYYA SIAGKPAGEA
VSLGKAGDCL VTRVPLGVCG AIIPWNMPVI IMGWKVGPAL LSGNTLVLKP ASTAPLTNLK
IAGLFSEAGL PAGVLNVVTG SGEIAGEALV QHKRVKKISF TGNGITGRRI RELTGNRLAA
LTLELGGSDP MIVMADADVK KAVEGAIRGR FYNAGQVCTA VKRLYLHEKI AEEFMRELTT
KVEGLKVGNG LVPGTDMGPL NSPAQRDRIA TVVHEITAND EGKILTGGCP VPGKEYERGN
FYKPTLVGDV PPDAALLKNE IFGPVLPVMT FPDLATAIAE ANRSLYGLGA SVWTRDLATV
KEFFTHVHAG IVWVNRHLTL PPEVPFGGTE ESGIGRENGF HAIDSYTQTK TLFLGW
|
|---|
| |