Gene Mboo_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1306 
Symbol 
ID5411951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1328987 
End bp1330897 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content60% 
IMG OID640868537 
Productmolybdenum cofactor synthesis domain-containing protein 
Protein accessionYP_001404467 
Protein GI154150849 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme
[COG1910] Periplasmic molybdate-binding protein/domain 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0654369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.053504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAC GCTACCTTTC CCTTACCTCG TTTGACGAGG CATTGTCCCT TCTCAAATCC 
ACGTTTCCCG GTCCCGGCCG GACCGAGATA GTCCCGGTTA TCCGGGCATT GGGACGGGCC
GTGGCACAAC CGGTGTATGC CCGGTACGCG GTTCCCGAGG TAAACCTTGC TGCCATGGAC
GGGATTGCTG TAAAGAGCCG GGACACGATC GGGGCCTCGG AACAGCACCC GGTCACGCTC
GGGCAGGCAG CACGGGTCAA TACCGGAAAC GTTCTCCCTG AAGGATTCGA TGCAGTGATC
ATGATTGAGG ACACTTGGGA GGTAGGTGAT AAATTCCAGA TCCGGAAAAG TGCCTCCCCC
TGGCAGCACG TTCGCCCGGC CGGGGAAGAC ATCCGGGAGG GACGGCTTGT CCTCCCCAAA
GGGCACGTAG TGCGGGCCTT TGATATCGGG GCCCTTGCCA CCTATGGGAT CACTGAGATC
GAATCCACCA CCGCAGGTGT AGGCATCATC CCCACGGGAA GCGAGCTTGT CCCGCTCGGG
GTCCACCCGC GGCCTGGGCA GGTGGTGGAG AGTAACACTA TCATGGCGCA GGTGCTTCTC
GAATCTATGG GGGCTTCCTG TACGCGCCTG CCCATTGTCC GGGACGATCC CACCCTTATT
GAAGAAGCAC TCAGGGCCGC TGCAACCGCA AACGACCTGG TTATTATCTC CGCCGGTTCC
TCGGCCGGCA CTCGCGACTT CACAGCCGGG GCAATTGCTG CGGTCGGCGA GCTGATCTTC
CATGGGGTTG CAGTAAAACC GGGTAAACCG ATGATGCTAG GGAAGATTTC AGGAACACCG
GTTATCGGTC TGCCCGGCTA TCCCCTTGCA GCCCAGACCG TGCTGCGCGA GTTTGCCGTC
CCGCTCTTGG AACACTGGGG GCTTGCACCC TTCGCGAAAC ACGTGGTCCG TGCACGTCTT
GCCACACCCC TTGCATCAGA TCTCGGGTTT GACGAGTTTG TCCCGGTCTC TGTGGGAAGA
ATCGGCACCC GGCACTGGGG GATCGCCCGC TCCCGGAGCG CGGTTGTACA GATGTCCACT
GTCAGGTCCA ACGGCTATGC CCATATCCCG GCCCGGATCG AGGGGTACGA TGCAGAACAT
GAGCTCGATG TTTTCCTCAC CACCGACCCG GCCAATATCG AGAGGACGCT TCTCTTCTCA
GGTGCCATCG ACCCGGTGCT TGAGGAACTG GGCAACCTTG CCCATGACCG GGGACTCTTC
ATCCATACGG CAAATGCGGG AAACACCAGT GCCATCCTTT CGCTCAAACG GAATGCCTGC
CATGCAGCGC CCATGAGCTT GCCGGCCTTC TCCCTGCTCC GGGAAAACGC TACCCTTTTT
TCCCTGCTTG AATCCATGGA TCTTGTCTTT GTCAATATCG CCACCCGGGA GCAGGGAATT
GTTTCGTCAA AGGGAGTTAG TCCCGATACC CTTGATACTG TCTGCTGGGT CAACTCGGGC
AGGGACACAC CGGCCCGGCT CCTCTTTGAT ACACTGCTTG CCTCACACCA CCTTTCCCCG
GCCCAGGTAC GGGGATACAC AACTGAAGCA GCAACCCCGG GTGCGATAGC GGCCGCAGTC
CAGGCCGGAC AGGCCGATGC GGGCATCTGC TCGGAGGGGC TGGCCACATC CCACGGGCTC
CGGTTCTTCC CCCTTGCAAA GGAGCAGTAC GAACTGGTGA TGCGCAGGGA GATGCTCGGC
GATCCCCGGA TTATCTCCCT TATTTCCCTT GTCCAGGGCC GGGAGTTTAA GGCCCAGCTT
GAACGAACCG GGGCCTATCA TACGGCACTG ACCGGCAGGA TCCGCAGCCT CTCATCGGAT
ACTTCCGATA TTGATATTCC CTCATCTGCT CCTCCGTCCG TCATCCCATA A
 
Protein sequence
MVKRYLSLTS FDEALSLLKS TFPGPGRTEI VPVIRALGRA VAQPVYARYA VPEVNLAAMD 
GIAVKSRDTI GASEQHPVTL GQAARVNTGN VLPEGFDAVI MIEDTWEVGD KFQIRKSASP
WQHVRPAGED IREGRLVLPK GHVVRAFDIG ALATYGITEI ESTTAGVGII PTGSELVPLG
VHPRPGQVVE SNTIMAQVLL ESMGASCTRL PIVRDDPTLI EEALRAAATA NDLVIISAGS
SAGTRDFTAG AIAAVGELIF HGVAVKPGKP MMLGKISGTP VIGLPGYPLA AQTVLREFAV
PLLEHWGLAP FAKHVVRARL ATPLASDLGF DEFVPVSVGR IGTRHWGIAR SRSAVVQMST
VRSNGYAHIP ARIEGYDAEH ELDVFLTTDP ANIERTLLFS GAIDPVLEEL GNLAHDRGLF
IHTANAGNTS AILSLKRNAC HAAPMSLPAF SLLRENATLF SLLESMDLVF VNIATREQGI
VSSKGVSPDT LDTVCWVNSG RDTPARLLFD TLLASHHLSP AQVRGYTTEA ATPGAIAAAV
QAGQADAGIC SEGLATSHGL RFFPLAKEQY ELVMRREMLG DPRIISLISL VQGREFKAQL
ERTGAYHTAL TGRIRSLSSD TSDIDIPSSA PPSVIP