Gene Mboo_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1305 
Symbol 
ID5411950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1328372 
End bp1328803 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID640868536 
Producthypothetical protein 
Protein accessionYP_001404466 
Protein GI154150848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00231898 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0638651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACATC TTTGGATTAC CGGAGTGTGT TTCGGAAGAG AATATTTCGC CGGATCTGGT 
TCCCGGGAGG GATCCGATCT CACGTGGGAA GTGCGGGTGA AGAAGGCAAA AAAGACCGTG
GCAGTTGTGT TCTATTCTCC CACGTATGCG ATCTGCCACC GCATGAATCC ATATTTCCGA
CACCTGTTAA GAAAAGGATT AAGGATGTAC TTCTGCGGTG GAGACAATGC GCTAAGTACT
CAGCAGCGAT TGATCATGAG ATTAGCGCAT ATGGCAGATC CAGTCCCAGT TCTGGCAACC
GGCTGGCAGA GTCCGACAAA GTTACATTTT AATACATCAA TGAACAAAAG TATGCATCAG
GTACGGTTTC CCCGCCATGA CAGGCGGTAT CGCATCACGT TTGTGTATGC CCCTCTCGAT
CCAGTGCCTT AA
 
Protein sequence
MSHLWITGVC FGREYFAGSG SREGSDLTWE VRVKKAKKTV AVVFYSPTYA ICHRMNPYFR 
HLLRKGLRMY FCGGDNALST QQRLIMRLAH MADPVPVLAT GWQSPTKLHF NTSMNKSMHQ
VRFPRHDRRY RITFVYAPLD PVP