Gene Mboo_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1291 
Symbol 
ID5409952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1313834 
End bp1314889 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content54% 
IMG OID640868520 
Producthypothetical protein 
Protein accessionYP_001404452 
Protein GI154150834 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0482108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0196495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC CCTCTTCCCT CTCCGTGACC GAGCGCGTCC TGCTCTGCCT TGGGCTTCTG 
GTCATTATTG TCCTTGGGAT AAAAATGACC GGCTCGGTTG TTACCATTCT TCTGGTCGCA
CTCGTGCTTG CCCTCCTGCT TTACCCGGCA ACACGATGGC TGCAGCAGCG GGGCCTTCCC
TATCCGGCGG CAGTTGGCAT GGTGACACTC ATTGCCGTGA TCTGTGTCGT ACTCTTCGTA
GAGCTCACGG TCATGTCCTT TAATGTTATT ATCACCGATC TCCCCCTGTA CCAGCAGGAA
CTTGCGCTCA GGCTTGGCGA TATCTCGACG TTCCTTGGAT CCTACGGTAT CAGCACCGGG
TTTCTCTTTT CATCCGTACC CAACCTCGCA GCCATTATCC CGGCACTGGT CTCATCACTT
GCAAACCTCA GCGCCGATAT GATGGACCTT TTCTTTATCG CGGTTACCAC GTTTTTCATC
CTGCTCGAAG CCCCGCCAAT GATTAGCCGG ACAGAAGAGA TGCTCAAAGA AAGCCCGGAG
AAACTCTGGC ACCTGGCAAA GATGAGCGGG TTTGTCGTGG ATTTCATGGT CGTGCGCACC
GAGACAAACT TCGTTCACGG GATACTTTTT GGCGGATCGC TTGCGCTGAT GGGGGTGCAT
GCCGCGGTCC TCTGGGGGAT TTTGACCTTT GTCCTTGGCT ACATCCCGTA CTTCGGCCTG
ATTCTCGCTG CGATCCCGGC CATTTTCTTT GCCTGGCTCC AGTTTGGAAT CTGGGGAGCG
GTTGCCGTTG TTGCCATTGT CTGCGTCCTC AACCTGATCG TGGAAAACCC GGTCTTCTCC
TACCTTGCAT CCCGCAAGTT CGAGATCCCG GCACTCGTTG TCATCTTCTC CGTGATCTTC
TGGGGCTGGC TGCTTGGCCT TGCAGGGATG CTCTTTTCTG TTCCCTTCAC CTTAATGGTA
GTCACGCTCG TTTCGTTCTC CGATGAACTT TCGTGGGTCA ACACCCTGCT CGGGCTCGAT
CCTCTTTTTG TGGAAAAAGA GGGGCGGGGT ACATAA
 
Protein sequence
MSFPSSLSVT ERVLLCLGLL VIIVLGIKMT GSVVTILLVA LVLALLLYPA TRWLQQRGLP 
YPAAVGMVTL IAVICVVLFV ELTVMSFNVI ITDLPLYQQE LALRLGDIST FLGSYGISTG
FLFSSVPNLA AIIPALVSSL ANLSADMMDL FFIAVTTFFI LLEAPPMISR TEEMLKESPE
KLWHLAKMSG FVVDFMVVRT ETNFVHGILF GGSLALMGVH AAVLWGILTF VLGYIPYFGL
ILAAIPAIFF AWLQFGIWGA VAVVAIVCVL NLIVENPVFS YLASRKFEIP ALVVIFSVIF
WGWLLGLAGM LFSVPFTLMV VTLVSFSDEL SWVNTLLGLD PLFVEKEGRG T