| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1288 |
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| Symbol | |
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| ID | 5409949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1310869 |
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| End bp | 1311516 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640868517 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001404449 |
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| Protein GI | 154150831 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0315957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00536276 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGGAA CGGAACCGGC ACACGAGAAA AGGGACGCGA TTCTCAGAAC GGCGCTCGTG
CTCTTCTGCG AGCGCGGGTT TCACGGCACG CCGACATCGC TTATCTCCCG CGAGGCCGGG
GTGGCAACCG GCACGCTCTT TTTTTATTTC CCCACAAAGG AAGAGCTCAT CGACACCCTG
TACCGCCAGA TCAAGGGAGA AGCCGGCGCG GCTTTAAAAA CTGGCATTGA CAACGAACCA
GCCATACAAC AGAAGCTCTG CCGGGTATGG GAAAATGCAA TTGCCTGGGT AACAGAAAAC
CCGGACAAAT ACCGGTTCAT GGAGCAGTTT GCCCATTCGC CGTTTGTCTC CTCCACCGCA
CACGAAGAGG GCATGTCCCA TTTTCTCTTT TTGCTGGAGC TGATCCGGGA GGGGATACGG
GAGGGCATTA TCCGGGACTA CGACCCTGCA CTTCTCTGCT CGATCCTTGC AACCTCACTT
TCCGGGATTG CCCCCCGTAT CACTGCAGAA AAAGATTCTG CACAAAAAAC CCTTCTTACC
CGGCAGGCCC TGGCATTCCT CTGGAACGGG CTTGCAGCAC ATCCTGATGC CTGCGCCAGC
CCAGAAGATC AGGAAACAAA AAAGAACAAA CGAGGCAAAA GACCATGA
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| Protein sequence | MSGTEPAHEK RDAILRTALV LFCERGFHGT PTSLISREAG VATGTLFFYF PTKEELIDTL
YRQIKGEAGA ALKTGIDNEP AIQQKLCRVW ENAIAWVTEN PDKYRFMEQF AHSPFVSSTA
HEEGMSHFLF LLELIREGIR EGIIRDYDPA LLCSILATSL SGIAPRITAE KDSAQKTLLT
RQALAFLWNG LAAHPDACAS PEDQETKKNK RGKRP
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