Gene Mboo_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1286 
Symbol 
ID5409947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1308959 
End bp1310191 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content58% 
IMG OID640868515 
Productaldo/keto reductase 
Protein accessionYP_001404447 
Protein GI154150829 
COG category[R] General function prediction only 
COG ID[COG1453] Predicted oxidoreductases of the aldo/keto reductase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0119891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00591823 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCTACC GTACCGTTCC AAAAACCGGC GAACAGCTTT CCGCGCTTGG CTTTGGCTGC 
ATGCGCTACC CGTCAAAGAA CCGGGGGATT GATGAAGAGC GGACGATCCG CCAGATCCGC
CACGCGATCG ATAACGGGGT CAATTATTTC GACACCGCTC CGCTCTACCA CCTGGGAAAA
AGCGAACCGA TCCTTGCAAA GGCGCTCCAG GACGGGTACC GCCAAAAGGT AAAGATTGCA
ACAAAGCTTC CCCACTGGAC GGTCAAGGAG CGTGCCGACA TGGACCGGAT CCTTGCAAAG
CACCTGGCAA CCCTCCAGAC CGATCATATC GATTACTACC TGCTCCACAG CCTTGCCGGA
GAGAGCTGGG AGAGACTCCT GAAGCTTGGG ATCCTTGAGT TCCTCGATTC GGCAAAGGCA
TCCGGGAAGA TCAAAAATGC CGGGTTCTCG TTCCACGGAA ATTTCGAGGA ATTTAAACCA
ATCGTGGACG GGTACGACTG GCAGTTCTGC CAGATCCAGT ACAATCTTCT TGACGAGCAC
AACCAGGCCG GGACCGCCGG GCTCCGGTAT TCCGCAGGAA AAGGACTCGC GGTGATGGTG
ATGGAGCCCC TGCGGGGGGG AAGCCTTGCC GGCCATGTAC CGGACGAAGT GCAGAAGATC
TATGACCGGG CACCGGTAAA AAGATCCGCG GCCGAATGGG CCCTGCGCTG GGTACTTGAC
CACCCGGAGG TGACCGTTGT CCTCTCGGGC ATGAACGACG AGGCCCAGAT CGACGAGAAT
ATCCGTACAG CAGGTGCGGT CCTTCCCCGG TCACTCACAC CCGAAGACCG GGCCATCCTG
GACGATGCAA AGGCTGCATT CAGACAGCTC ATGAAAGTGG GCTGCACCGG CTGCGGGTAC
TGCATGCCCT GCCCGGCCGG GGTGGATATC CCGGGTTGTT TTGCATTCTA CAATGCCCGC
CACCTCTTCC CCAAAGACAA AAATCCGCGT TTCCAGTACA TCGGCCACCA CGGAGGCCTC
TTAAACAAGC CCTCAAATGC CGGCCTGTGC AAGAACTGCG GCAAGTGCGA GAAGGCCTGT
CCCCAGCACC TGCCGATCCC CCGGCTCCTA AAGGATGTGA AAGCCGACAT GGAGGGCATG
GCAATGCTGC TTGTCCCGGT TCTTAAGGGA GGACTCTGGT GCATGAACGC GGCCTCGGGC
ATCCGCTCGG TCTTTTCCCG GGAGAAAACG TAA
 
Protein sequence
MLYRTVPKTG EQLSALGFGC MRYPSKNRGI DEERTIRQIR HAIDNGVNYF DTAPLYHLGK 
SEPILAKALQ DGYRQKVKIA TKLPHWTVKE RADMDRILAK HLATLQTDHI DYYLLHSLAG
ESWERLLKLG ILEFLDSAKA SGKIKNAGFS FHGNFEEFKP IVDGYDWQFC QIQYNLLDEH
NQAGTAGLRY SAGKGLAVMV MEPLRGGSLA GHVPDEVQKI YDRAPVKRSA AEWALRWVLD
HPEVTVVLSG MNDEAQIDEN IRTAGAVLPR SLTPEDRAIL DDAKAAFRQL MKVGCTGCGY
CMPCPAGVDI PGCFAFYNAR HLFPKDKNPR FQYIGHHGGL LNKPSNAGLC KNCGKCEKAC
PQHLPIPRLL KDVKADMEGM AMLLVPVLKG GLWCMNAASG IRSVFSREKT