Gene Mboo_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1280 
Symbol 
ID5410300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1301448 
End bp1301945 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content55% 
IMG OID640868508 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001404441 
Protein GI154150823 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00295] conserved hypothetical protein TIGR00295 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.107883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA AGCCGGAACG CTGCATTGAT CTTCTCAAAA AAGCTGGCTG TAAACCGAAG 
GTTATCGCTC ATTGCGAGGC CGTCTGTACC TGTGCACGGG GTTATGCCCG GCAGACCCCG
CTTGCCGATA CGGATCTGGT GATCGCAGGC GCCCTCATTC ATGATATCGG CCGTGGCAGC
ACGCATTCTT TAGGGCATGC GCAACGAGGG GCCGATCTCC TGCGCGGGAT GAAATGTCCC
GAGAAACTTG CACGGATCGT GGAGTGCCAC ACCGGCGCCG GCCTTTCTGC AGACGAATGT
ACGCTCCTTG GCCTTCTTCC CCGCGACTGC ATGCCGCAGA CCATAGAAGA GAAGATTGTC
ACGAACGCCG ATAACCTGAT TGCCGGTGCA AAACGGGTAA CCATCGAAGA GGAGATTGCG
GGCGCGATCC ACCTGCCAAG AAAGATCAGG AAAAGAATGT ACCGCCTTTT TAATGAAGTG
GAACTGCTCA CCCTTTAA
 
Protein sequence
MPEKPERCID LLKKAGCKPK VIAHCEAVCT CARGYARQTP LADTDLVIAG ALIHDIGRGS 
THSLGHAQRG ADLLRGMKCP EKLARIVECH TGAGLSADEC TLLGLLPRDC MPQTIEEKIV
TNADNLIAGA KRVTIEEEIA GAIHLPRKIR KRMYRLFNEV ELLTL