| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1272 |
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| Symbol | |
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| ID | 5410292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1295956 |
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| End bp | 1297464 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640868500 |
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| Product | hypothetical protein |
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| Protein accession | YP_001404433 |
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| Protein GI | 154150815 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1900] Uncharacterized conserved protein
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.573905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.202624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAAT CCATCGGGCA GATCAACGAG CGGATCCGCG ACGGCAGTGC CCATGTTGTC
ACCGCGGAGG AGATGCCCCG CATCGTTGAC GAGCTGGGCG AGGAAGGGGC GCTCAGGGAA
GTTGACGTTG TCACCACCGG AACGTTTGGC GCGATGTGTT CGTCCGGCGC TTTTTTGAAC
TTCGGGCACT CGGAGCCACC GATCCGTATG GAGCGGATCT GGCTCAATGA TGTAGAAGCA
TACGGGGGCC TTGCCGCGGT GGACACCTAC ATTGGGGCAA CCCAGCAGTC AGAGACACTT
GACGAGCGGT ACGGCGGAGC GCACGTCATC GAAGACCTGG TATCGGGAAA ATCAGTTGAA
CTGCGGGCAA GCTCCCGGGG TACCGACTGC TACCCGCGCA GGACGATTAC CACCGAGCTC
CTGCTGGAAA ACCTCAACCA GGCGATCATG TGCAACCCGC GCAATGCCTA CCAGCGGTAC
AATGCGGCAA CCAATACCAC CGACAGGCTC CTGCATACCT ACATGGGAAC GCTCCTTCCC
AATACCGGCA ATATCACGTA CTCGGGCGCC GGGCTGCTCA ACCCGCTCAC CAACGATCCC
CACCTGCGGT TGATTGGAAG CGGTGTCCCA ATCTTCCTGT GTGGTGCGAA GGGTATGGTT
GTTGGGGAGG GGACCCAGCA TTCACCCGGT GGCGGTTTTG GCACGCTGAT GGTGACCGGC
AATCTCAAGG AAATGTCTCC CGAGTACCTC CGTGCTGCCA CCATGACCGG CTACGGTGTT
ACGCTCTACG TTGGAATTGG CGTACCGCTA CCGGTGCTTG ACCTTGACGT GGTCCGGGCA
ACTGCCGTCC GGGACGAGGA CATCCCGGTT GACCTGCTTG ACTATGGCGT GCCCAGCCGC
GCCCGCCCGA AGGTCAGGAG CGTCACCTAT GCCGAGCTCC GGTCCGGTTC CGTGGAGATC
AACGGGGAGC AGGTGCGCAC CTCGTCCCTG TCGAGTTTCC GCAGGGCGCG GCAGGTAGCA
GCAGAGCTCA AAAACTGGAT AGGAAAAGGA AAGATGGAGC TTGCGCTTCC CACCCGCCCC
ATCGATGCCA CAAAAAAAGT GCACCCCATG CATGAGACCA CGAGCGGCCC GCGTGTGCTC
GACATCATGG ACCGACAGGT GGTCAGTGTG AGCGAGGGTG AGGAGATCCA GACTGCAGCG
CAGAAACTGC TCAAAGGGGA GACTAACCAC CTCCCGGTCA TCGGCCGTGA TGGCAGGCTT
GCCGGGATCA TAACCACTTT TGATATCTCT AAAGCCGTGG CAAACCCCGG CAAGGCATCG
ACCGTGGGCG ATATTATGAA AAAGAAGGTG GTGACCACGA CAACTGATGA GGCGGTGGAT
GTTGCCGTAC GAAAGCTCGA ACAGAACAAC ATCAGTGCGC TGCCCGTCCT TGATGCCGAT
CGCCATGTGA TCGGGATGCT CACGGCAATA AATCTCGGGA AGCTCTTTGG CGGAAGGTGG
CTGAAATGA
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| Protein sequence | MHKSIGQINE RIRDGSAHVV TAEEMPRIVD ELGEEGALRE VDVVTTGTFG AMCSSGAFLN
FGHSEPPIRM ERIWLNDVEA YGGLAAVDTY IGATQQSETL DERYGGAHVI EDLVSGKSVE
LRASSRGTDC YPRRTITTEL LLENLNQAIM CNPRNAYQRY NAATNTTDRL LHTYMGTLLP
NTGNITYSGA GLLNPLTNDP HLRLIGSGVP IFLCGAKGMV VGEGTQHSPG GGFGTLMVTG
NLKEMSPEYL RAATMTGYGV TLYVGIGVPL PVLDLDVVRA TAVRDEDIPV DLLDYGVPSR
ARPKVRSVTY AELRSGSVEI NGEQVRTSSL SSFRRARQVA AELKNWIGKG KMELALPTRP
IDATKKVHPM HETTSGPRVL DIMDRQVVSV SEGEEIQTAA QKLLKGETNH LPVIGRDGRL
AGIITTFDIS KAVANPGKAS TVGDIMKKKV VTTTTDEAVD VAVRKLEQNN ISALPVLDAD
RHVIGMLTAI NLGKLFGGRW LK
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